RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FAM234AQ9H0X4 552 aa12.47□□□□□ -0.41
SHROOM1-203ENST00000378679 HSD17B6O14756 317 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 ZNF354AO60765 605 aaPredicted RBP12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 IFNA2P01563 188 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 NDUFB7P17568 137 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 GSK3AP49840 483 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 ZNF239Q16600 458 aaKnown RBP12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 IGSF11Q5DX21 431 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 LINC00114Q6XXX2 140 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 CISD2Q8N5K1 135 aaKnown RBP12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 SLC39A7Q92504 469 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 PLK3Q9H4B4 646 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 FREM3P0C091 2139 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 A0A0D9SG52 128 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 GABRA1P14867 456 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 RPL23AP62750 156 aaKnown RBP12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 TUSC1Q2TAM9 212 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 FBXW9Q5XUX1 488 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 OR4D6Q8NGJ1 314 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 ZNRF4Q8WWF5 429 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 SGK3Q96BR1 496 aa12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 ADAT1Q9BUB4 502 aaKnown RBP12.46□□□□□ -0.41
SHROOM1-203ENST00000378679 C9orf172C9J069 976 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 KLF7O75840 302 aaPredicted RBP12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 SRPXP78539 464 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 PDZK1IP1Q13113 114 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 MSMO1Q15800 293 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 SLC25A47Q6Q0C1 308 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 ZNF610Q8N9Z0 462 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 UBALD1Q8TB05 177 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 GLRX2Q9NS18 164 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 NDRG3Q9UGV2 375 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 ZNF407Q9C0G0 2248 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 NDUFB6O95139 128 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 IFNA17P01571 189 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 GIPP09681 153 aaPredicted RBP12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 ARRDC1Q8N5I2 433 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 RAB39BQ96DA2 213 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 DLL4Q9NR61 685 aa12.46□□□□□ -0.42
SHROOM1-203ENST00000378679 SNRPGP15A8MWD9 76 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 CDC14BO60729 498 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 TPPPO94811 219 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 ADRB1P08588 477 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 LGALSLQ3ZCW2 172 aaPredicted RBP12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 PPP1R3EQ9H7J1 279 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 RNF212BA8MTL3 300 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 CEBPZOSA8MTT3 80 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 SPRY3O43610 288 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 GPR137BO60478 399 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 TSPAN15O95858 294 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 EFNB2P52799 333 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 OR2B8PP59922 312 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 PEA15Q15121 130 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 CLLU1Q5K131 121 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 TMEM200AQ86VY9 491 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 FAM219AQ8IW50 185 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 SIGLEC12Q96PQ1 595 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 A0A1W2PNV4 684 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 SOCS1O15524 211 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 MED6O75586 246 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 CD59P13987 128 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 SERPINF1P36955 418 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 PPP1CBP62140 327 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 SLC51BQ86UW2 128 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 OR2Z1Q8NG97 314 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 HAS2Q92819 552 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 NXF2Q9GZY0 626 aaKnown RBP12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 LHFPL6Q9Y693 200 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 TICRRQ7Z2Z1 1910 aa12.45□□□□□ -0.42
SHROOM1-203ENST00000378679 ABCA4P78363 2273 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 PIN1P1O15428 100 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 ZNHIT1O43257 154 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 SLC6A1P30531 599 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 PSG4Q00888 419 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 RTN4IP1Q8WWV3 396 aaPredicted RBP12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 C14orf79Q96F83 325 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 RYDENQ9NUL5 291 aaKnown RBP12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 LOC102723996A0A087X1L8 192 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 RPS10-NUDT3A0A1W2PQS6 291 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 TERTO14746 1132 aaKnown RBP12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 RPS10P46783 165 aaKnown RBP12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 OR5T1Q8NG75 326 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 SNRNP200O75643 2136 aaKnown RBP12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 MEX3AA1L020 520 aaKnown RBP12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 CD1AP06126 327 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 COL19A1Q14993 1142 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 GPR157Q5UAW9 335 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 DMBX1Q8NFW5 382 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 OR13G1Q8NGZ3 307 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 SRXN1Q9BYN0 137 aa12.44□□□□□ -0.42
SHROOM1-203ENST00000378679 LYPD3O95274 346 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 VSIG8P0DPA2 414 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 SKA3Q8IX90 412 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 FDCSPQ8NFU4 85 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 OR11H4Q8NGC9 324 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 POC1BQ8TC44 478 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms