RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 IRF3Q14653 427 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 ZNF788Q6ZQV5 615 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 SERPINA12Q8IW75 414 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 OR13C5Q8NGS8 318 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 GPR148Q8TDV2 347 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 RAB40AQ8WXH6 277 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 GAFA1Q96PS6 74 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 C7orf69Q9H7B7 122 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 HES4Q9HCC6 221 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 MTCH1Q9NZJ7 389 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 ZNF222Q9UK12 451 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 ERGIC3Q9Y282 383 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 POLDIP2Q9Y2S7 368 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 LSM2Q9Y333 95 aaKnown RBP17.04■□□□□ 0.32
TRIM13-203ENST00000378183 TPRKBQ9Y3C4 175 aa17.04■□□□□ 0.32
TRIM13-203ENST00000378183 LOC105371242A0A075B767 164 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 IGHV2-70DA0A0C4DH43 119 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 F8VVB4 439 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 F8VWA3 439 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 PLATP00750 562 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 SRD5A1P18405 259 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 PRKACBP22694 351 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 ATP1B3P54709 279 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 MTCP1P56278 107 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 RPS11P62280 158 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRIM13-203ENST00000378183 PAX8Q06710 450 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 ZNF529Q6P280 563 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 SPSB1Q96BD6 273 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 OPALINQ96PE5 141 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 SPACA5Q96QH8 159 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 DNTTIP1Q9H147 329 aa17.03■□□□□ 0.32
TRIM13-203ENST00000378183 TRBV5-5A0A0J9YX44 114 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 KIR2DS1A0A191URI9 304 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 ALX3O95076 343 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 ADRA2CP18825 462 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 TAS2R43P59537 309 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 LHFPL2Q6ZUX7 228 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 SLC25A26Q70HW3 274 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 SLC36A1Q7Z2H8 476 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 OR5D14Q8NGL3 314 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 SLAMF9Q96A28 289 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 OR5M11Q96RB7 305 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 ZNF184Q99676 751 aaPredicted RBP17.02■□□□□ 0.32
TRIM13-203ENST00000378183 NUDT16L1Q9BRJ7 211 aaKnown RBP17.02■□□□□ 0.32
TRIM13-203ENST00000378183 MND1Q9BWT6 205 aa17.02■□□□□ 0.32
TRIM13-203ENST00000378183 JMJD1CQ15652 2540 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 PNMA8CA0A1B0GUJ8 204 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 SULT1B1O43704 296 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 INMTO95050 263 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 SRP14P37108 136 aaKnown RBP17.01■□□□□ 0.31
TRIM13-203ENST00000378183 ACSM1Q08AH1 577 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 IKZF1Q13422 519 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 DGUOKQ16854 277 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 CD177Q8N6Q3 437 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 RFT1Q96AA3 541 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 CEP19Q96LK0 163 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 TAS2R4Q9NYW5 299 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 MAB21L2Q9Y586 359 aa17.01■□□□□ 0.31
TRIM13-203ENST00000378183 NKX6-3A6NJ46 265 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 RFPL4AA6NLU0 287 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 RFPL4AL1F8VTS6 287 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 SIGLEC5O15389 551 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 DENRO43583 198 aaKnown RBP17■□□□□ 0.31
TRIM13-203ENST00000378183 SPRY1O43609 319 aaPredicted RBP17■□□□□ 0.31
TRIM13-203ENST00000378183 RGS10O43665 173 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 NXPH2O95156 264 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 FSHBP01225 129 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 CD1AP06126 327 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 OCM2P0CE71 109 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 CELP19835 753 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 GABRA2P47869 451 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 POU3F4P49335 361 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 PDZK1IP1Q13113 114 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 SMIM21Q3B7S5 101 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 YIF1BQ5BJH7 314 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 RBM48Q5RL73 367 aaKnown RBP17■□□□□ 0.31
TRIM13-203ENST00000378183 CD276Q5ZPR3 534 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 BTN2A1Q7KYR7 527 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 C1QL2Q7Z5L3 287 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 OR51A2Q8NGJ7 313 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 ST8SIA4Q92187 359 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 TMEM106AQ96A25 262 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 ORAI1Q96D31 301 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 SDSLQ96GA7 329 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 METRNQ9UJH8 293 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 AUP1Q9Y679 476 aa17■□□□□ 0.31
TRIM13-203ENST00000378183 IGKV1-12A0A0C4DH73 117 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 NDUFB3O43676 98 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 IGKV1D-12P01611 117 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 NPBWR2P48146 333 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 CEBPDP49716 269 aaPredicted RBP16.99■□□□□ 0.31
TRIM13-203ENST00000378183 IL13RA1P78552 427 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 BDH1Q02338 343 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 SPHARQ15513 63 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 BTNL3Q6UXE8 466 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 MKXQ8IYA7 352 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 ZNRF1Q8ND25 227 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 MED30Q96HR3 178 aa16.99■□□□□ 0.31
TRIM13-203ENST00000378183 ENSAO43768 121 aaKnown RBP16.98■□□□□ 0.31
TRIM13-203ENST00000378183 ANGPTL7O43827 346 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms