RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 LEAP2Q969E1 77 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ABHD17AQ96GS6 310 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 HRH4Q9H3N8 390 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PRMT8Q9NR22 394 aaPredicted RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 ASF1BQ9NVP2 202 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 TMEM38BQ9NVV0 291 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 KCNN3Q9UGI6 736 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 RAB22AQ9UL26 194 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 PCDHGA9Q9Y5G4 932 aaKnown RBP7.06□□□□□ -1.28
CKAP2-203ENST00000378037 GMEB1Q9Y692 573 aa7.06□□□□□ -1.28
CKAP2-203ENST00000378037 IGLV3-12A0A075B6K2 115 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 TRAV1-2A0A0B4J238 106 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 B4E171 279 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 MCRIP1C9JLW8 97 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 NPIPB7O75200 414 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 DHRS3O75911 302 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 IFNA21P01568 189 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 NDUFB7P17568 137 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 TSPAN7P41732 249 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 BDH1Q02338 343 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 PPA1Q15181 289 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 OR8G1Q15617 311 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 C2orf68Q2NKX9 166 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 SLC25A30Q5SVS4 291 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 RFPL4BQ6ZWI9 263 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 CALHM1Q8IU99 346 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 CCL17Q92583 94 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 SDSLQ96GA7 329 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 PHB2Q99623 299 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 OR2H1Q9GZK4 316 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 DYNLRB1Q9NP97 96 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 G6PC2Q9NQR9 355 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 MRPS18AQ9NVS2 196 aaKnown RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 GFOD1Q9NXC2 390 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF391Q9UJN7 358 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 WNT9BO14905 357 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 HMGB3O15347 200 aaKnown RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 RCC1P18754 421 aaPredicted RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 CNN3Q15417 329 aaKnown RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 PAQR4Q8N4S7 273 aaPredicted RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 PRELID1Q9Y255 219 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 RHBDL1O75783 438 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 PRB4P10163 310 aaPredicted RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 BCL3P20749 454 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 NME2P22392 152 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 SLC6A1P30531 599 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 SWI5Q1ZZU3 235 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 EIF2S3LQ2VIR3 472 aaKnown RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 IGSF11Q5DX21 431 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 FAM209AQ5JX71 171 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF485Q8NCK3 441 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 ADPRHL1Q8NDY3 354 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 PPP1R1CQ8WVI7 109 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 ZC3H10Q96K80 434 aaKnown RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 LRFN3Q9BTN0 628 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF436Q9C0F3 470 aaPredicted RBP7.05□□□□□ -1.28
CKAP2-203ENST00000378037 TAS2R3Q9NYW6 316 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 MBD2Q9UBB5 411 aa7.05□□□□□ -1.28
CKAP2-203ENST00000378037 SMG1Q96Q15 3661 aaKnown RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 CD300LBA8K4G0 201 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 DEGS1O15121 323 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 ONECUT2O95948 504 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 APOC1P02654 83 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 RAF1P04049 648 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 ERP29P30040 261 aaKnown RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 SELENOVP59797 346 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 VAMP2P63027 116 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 DHRS2Q13268 280 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 TBC1D28Q2M2D7 210 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 AADACL3Q5VUY0 350 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 CD200R1LQ6Q8B3 271 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 BTNL3Q6UXE8 466 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 GSG1LQ6UXU4 331 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 NLRC3Q7RTR2 1065 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 OR11H4Q8NGC9 324 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 OR6S1Q8NH40 331 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 SLC25A40Q8TBP6 338 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 TMED6Q8WW62 240 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF703Q9H7S9 590 aaPredicted RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 FAM206AQ9NX38 181 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 B3GNT2Q9NY97 397 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 PROCRQ9UNN8 238 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 A3GALT2U3KPV4 340 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 PRRG2O14669 202 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 RRP8O43159 456 aaKnown RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 GALR2O43603 387 aaPredicted RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 RP2O75695 350 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 CST7O76096 145 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 SERPINE2P07093 398 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 VSIG10L2P0DP72 767 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 PIGPP57054 158 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 NKX6-1P78426 367 aaPredicted RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 UNC119Q13432 240 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 ENDOGQ14249 297 aaKnown RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 MICBQ29980 383 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 ZNF695Q8IW36 515 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 SGPP2Q8IWX5 399 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 CARFQ8N187 725 aa7.04□□□□□ -1.28
CKAP2-203ENST00000378037 NANOS1Q8WY41 292 aaKnown RBP7.04□□□□□ -1.28
CKAP2-203ENST00000378037 WNT2BQ93097 391 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms