RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 HES4Q9HCC6 221 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 AASSQ9UDR5 926 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 RPL36Q9Y3U8 105 aaKnown RBP13.85□□□□□ -0.19
HMGN4-201ENST00000377575 MAB21L2Q9Y586 359 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 ZNF20P17024 532 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 GALEQ14376 348 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 AWAT1Q58HT5 328 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 Q6YL49 198 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 CALHM1Q8IU99 346 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 EGFL6Q8IUX8 553 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 RDH10Q8IZV5 341 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 SYS1Q8N2H4 156 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 TMEM86BQ8N661 226 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 RNF166Q96A37 237 aaPredicted RBP13.84□□□□□ -0.19
HMGN4-201ENST00000377575 PELI1Q96FA3 418 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 ELL3Q9HB65 397 aaPredicted RBP13.84□□□□□ -0.19
HMGN4-201ENST00000377575 C8orf4Q9NR00 106 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 SIRT7Q9NRC8 400 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 FRRS1LQ9P0K9 344 aa13.84□□□□□ -0.19
HMGN4-201ENST00000377575 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.84□□□□□ -0.19
HMGN4-201ENST00000377575 A0A1W2PPH5 198 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 KNG1P01042 644 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 IGHA1P01876 353 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 RPSAP08865 295 aaKnown RBP13.83□□□□□ -0.2
HMGN4-201ENST00000377575 EEF1B2P24534 225 aaKnown RBP13.83□□□□□ -0.2
HMGN4-201ENST00000377575 PRDX2P32119 198 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 NANOS3P60323 173 aaKnown RBP13.83□□□□□ -0.2
HMGN4-201ENST00000377575 MRPL28Q13084 256 aaKnown RBP13.83□□□□□ -0.2
HMGN4-201ENST00000377575 NCR3LG1Q68D85 454 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 C1orf122Q6ZSJ8 110 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 UTS2BQ765I0 119 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 ANGPTL5Q86XS5 388 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 PDZD9Q8IXQ8 264 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 FAM185AQ8N0U4 392 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 CD177Q8N6Q3 437 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 DNAAF1Q8NEP3 725 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 CEP19Q96LK0 163 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 METTL8Q9H825 291 aaKnown RBP13.83□□□□□ -0.2
HMGN4-201ENST00000377575 OR14J1Q9UGF5 321 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 HHLA2Q9UM44 414 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 CAB39Q9Y376 341 aaPredicted RBP13.83□□□□□ -0.2
HMGN4-201ENST00000377575 POMT1Q9Y6A1 747 aa13.83□□□□□ -0.2
HMGN4-201ENST00000377575 CYB5AP00167 134 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 MELTFP08582 738 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 OCM2P0CE71 109 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 OCMP0CE72 109 aaPredicted RBP13.82□□□□□ -0.2
HMGN4-201ENST00000377575 PRKACBP22694 351 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 RBP2P50120 134 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 ATP1B3P54709 279 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 ERVK11-1P61568 191 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 ALKBH1Q13686 389 aaKnown RBP13.82□□□□□ -0.2
HMGN4-201ENST00000377575 KLHL22Q53GT1 634 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 C16orf87Q6PH81 154 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 LHFPL3Q86UP9 236 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 Q8IYB0 196 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 BATF2Q8N1L9 274 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 Q8N7P7 452 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 ZNF676Q8N7Q3 588 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 OR13C3Q8NGS6 347 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 HAVCR2Q8TDQ0 301 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 APH1BQ8WW43 257 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 SSMEM1Q8WWF3 244 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 SPSB1Q96BD6 273 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 ADAT3Q96EY9 351 aaPredicted RBP13.82□□□□□ -0.2
HMGN4-201ENST00000377575 FAM234AQ9H0X4 552 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 AMBNQ9NP70 447 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 ERVK13-1Q9NX77 482 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 MYRFQ9Y2G1 1151 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 FAM96BQ9Y3D0 163 aa13.82□□□□□ -0.2
HMGN4-201ENST00000377575 IGKV1-27A0A075B6S5 117 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 A0A0U1RQK1 487 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 CEBPDP49716 269 aaPredicted RBP13.81□□□□□ -0.2
HMGN4-201ENST00000377575 RPL31P62899 125 aaKnown RBP13.81□□□□□ -0.2
HMGN4-201ENST00000377575 LPCAT4Q643R3 524 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 FIP1L1Q6UN15 594 aaKnown RBP13.81□□□□□ -0.2
HMGN4-201ENST00000377575 LHFPL2Q6ZUX7 228 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 SLC25A26Q70HW3 274 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 LDLRAD3Q86YD5 345 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 PACRGLQ8N7B6 248 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 OR52I1Q8NGK6 324 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 OR5D13Q8NGL4 314 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 TBC1D15Q8TC07 691 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 SLAMF9Q96A28 289 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 FGGYQ96C11 551 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 COMMD4Q9H0A8 199 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 UNKLQ9H9P5 680 aaKnown RBP13.81□□□□□ -0.2
HMGN4-201ENST00000377575 NEK6Q9HC98 313 aa13.81□□□□□ -0.2
HMGN4-201ENST00000377575 MRPS18AQ9NVS2 196 aaKnown RBP13.81□□□□□ -0.2
HMGN4-201ENST00000377575 DSCAML1Q8TD84 2053 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 TMEM212A6NML5 194 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 OR4C45A6NMZ5 311 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 H0YAE9 185 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 RNASEK-C17orf49H0YIS7 233 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 FBP1P09467 338 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 CCDC159P0C7I6 412 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 ATF1P18846 271 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
HMGN4-201ENST00000377575 MTCP1P56278 107 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 RCN1Q15293 331 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 ZNF691Q5VV52 312 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms