RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 OR5B21A6NL26 309 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 ZFPL1O95159 310 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 ZNRF4Q8WWF5 429 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 ZNF385DQ9H6B1 395 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 AAMDCQ9H7C9 122 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 ZNF275Q9NSD4 429 aaPredicted RBP12.07□□□□□ -0.48
GPC6-201ENST00000377047 IL36GQ9NZH8 169 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 UMAD1C9J7I0 102 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 DNASE2O00115 360 aaPredicted RBP12.07□□□□□ -0.48
GPC6-201ENST00000377047 ZNF485Q8NCK3 441 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 OR8B12Q8NGG6 310 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 OR5V1Q9UGF6 321 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 CNTRLQ7Z7A1 2325 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 A0A1W2PPV9 198 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 DBX1A6NMT0 343 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 H7BYZ3 331 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 CST7O76096 145 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 S100A4P26447 101 aaKnown RBP12.07□□□□□ -0.48
GPC6-201ENST00000377047 OR3A1P47881 315 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 MMP15P51511 669 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 LINC00303Q3SY05 128 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 TMEM147Q9BVK8 224 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 PIGMQ9H3S5 423 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 F5P12259 2224 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
GPC6-201ENST00000377047 SNRPGP15A8MWD9 76 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 CYR61O00622 381 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 C1QBP02746 253 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 INSL4Q14641 139 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 SPINK9Q5DT21 86 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 DPF1Q92782 380 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 PTP4A1Q93096 173 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 FBXO8Q9NRD0 319 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 MRPL22Q9NWU5 206 aaKnown RBP12.07□□□□□ -0.48
GPC6-201ENST00000377047 OR6C3Q9NZP0 311 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 CLCF1Q9UBD9 225 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 PCOLCE2Q9UKZ9 415 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 EXOGQ9Y2C4 368 aaKnown RBP12.07□□□□□ -0.48
GPC6-201ENST00000377047 MPC1Q9Y5U8 109 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 F2RL2O00254 374 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 LIMS3P0CW19 117 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 LIMS4P0CW20 117 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 CLDN20P56880 219 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 AVPI1Q5T686 147 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 OR5AP2Q8NGF4 316 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 TMEM231Q9H6L2 316 aa12.07□□□□□ -0.48
GPC6-201ENST00000377047 PTPRZ1P23471 2315 aaPredicted RBP12.07□□□□□ -0.48
GPC6-201ENST00000377047 CDC42EP2O14613 210 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 GFRA3O60609 400 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 TMEM127O75204 238 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 WNT1P04628 370 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 FPR2P25090 351 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 PEBP1P30086 187 aaKnown RBP12.06□□□□□ -0.48
GPC6-201ENST00000377047 KIR2DS2P43631 304 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 TIPARPQ7Z3E1 657 aaKnown RBP12.06□□□□□ -0.48
GPC6-201ENST00000377047 ARRDC1Q8N5I2 433 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 TTTY12Q9BZ98 90 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 MARF1Q9Y4F3 1742 aaKnown RBP12.06□□□□□ -0.48
GPC6-201ENST00000377047 FUCA1P04066 466 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 MPGP29372 298 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 TMPRSS3P57727 454 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 FOXL2P58012 376 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 RXFP4Q8TDU9 374 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 PPP1R1CQ8WVI7 109 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 LOXL4Q96JB6 756 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 UCN2Q96RP3 112 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 C16orf97H3BN30 126 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 OR2C1O95371 312 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 FGF2P09038 288 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 OR4A8P0C604 315 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 PTHLHP12272 177 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 LIFP15018 202 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 OR2M3Q8NG83 312 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 OIT3Q8WWZ8 545 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 HGDQ93099 445 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 C10orf90Q96M02 699 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 RNF24Q9Y225 148 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 KNL1Q8NG31 2342 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 TCRBV16S1A1N1A0A5B0 115 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 PPP5D1E7EU14 171 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 OPN1MWP04001 364 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 OPN1MW2P0DN77 364 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 OPN1MW3P0DN78 364 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 ATG4DQ86TL0 474 aaPredicted RBP12.06□□□□□ -0.48
GPC6-201ENST00000377047 TRIP11Q15643 1979 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 CD80P33681 288 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 MRM1Q6IN84 353 aaKnown RBP12.06□□□□□ -0.48
GPC6-201ENST00000377047 H3F3CQ6NXT2 135 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 SLC22A18ASQ8N1D0 253 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 ST8SIA2Q92186 375 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 C14orf79Q96F83 325 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 CNTD2Q9H8S5 307 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 CLEC5AQ9NY25 188 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 ATG2BQ96BY7 2078 aa12.06□□□□□ -0.48
GPC6-201ENST00000377047 B4E171 279 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms