RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 LHFPL2Q6ZUX7 228 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 ANGPTL5Q86XS5 388 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 C8orf59Q8N0T1 100 aaPredicted RBP18.27■□□□□ 0.52
SRM-201ENST00000376957 LY6G5BQ8NDX9 201 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 OR5D14Q8NGL3 314 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 APH1BQ8WW43 257 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 GCDHQ92947 438 aaPredicted RBP18.27■□□□□ 0.52
SRM-201ENST00000376957 SLC25A28Q96A46 364 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 CEP19Q96LK0 163 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 JAM3Q9BX67 310 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 ISG20L2Q9H9L3 353 aaKnown RBP18.27■□□□□ 0.52
SRM-201ENST00000376957 TRBV23-1A0A0A0MS06 115 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 TRBV2A0A0J9YWF9 115 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 CASQ2O14958 399 aaPredicted RBP18.26■□□□□ 0.51
SRM-201ENST00000376957 WBP4O75554 376 aaKnown RBP18.26■□□□□ 0.51
SRM-201ENST00000376957 SFTPBP07988 381 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 DGUOKQ16854 277 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 CCDC58Q4VC31 144 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 OGFRL1Q5TC84 451 aaPredicted RBP18.26■□□□□ 0.51
SRM-201ENST00000376957 SERPINA12Q8IW75 414 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 ZNRF1Q8ND25 227 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 C8orf46Q8TAG6 207 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 CNIH3Q8TBE1 160 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 CPNE2Q96FN4 548 aaPredicted RBP18.26■□□□□ 0.51
SRM-201ENST00000376957 SIRPDQ9H106 197 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 GLS2Q9UI32 602 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 DHDHQ9UQ10 334 aa18.26■□□□□ 0.51
SRM-201ENST00000376957 CAB39Q9Y376 341 aaPredicted RBP18.26■□□□□ 0.51
SRM-201ENST00000376957 EXOSC1Q9Y3B2 195 aaKnown RBP18.26■□□□□ 0.51
SRM-201ENST00000376957 A0A1B0GW55 424 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 hCG_1809904A0A1W2PP81 198 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 A0A1W2PPE2 198 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 A0A1W2PR64 198 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 A0A1W2PRV1 198 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 OR4C45A6NMZ5 311 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 ANKRD65E5RJM6 399 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 KNG1P01042 644 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4L2P0CJ85 424 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4L3P0CJ86 424 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4L4P0CJ87 422 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4L5P0CJ88 424 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4L6P0CJ89 424 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4L7P0CJ90 424 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 MMP9P14780 707 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 ATF1P18846 271 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 AMY2BP19961 511 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 PRTN3P24158 256 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 EEF1B2P24534 225 aaKnown RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 AZGP1P25311 298 aaKnown RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 CAPGP40121 348 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 ELF3P78545 371 aaPredicted RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 SMN1Q16637 294 aaKnown RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4L9Q6RFH8 374 aaPredicted RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 C12orf54Q6X4T0 127 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 C1orf122Q6ZSJ8 110 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 SLC25A26Q70HW3 274 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 CALHM1Q8IU99 346 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 BCL6BQ8N143 479 aaPredicted RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 TSEN15Q8WW01 171 aaKnown RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 LHX4Q969G2 390 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 ADAT3Q96EY9 351 aaPredicted RBP18.25■□□□□ 0.51
SRM-201ENST00000376957 ZNF488Q96MN9 340 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 FAM234AQ9H0X4 552 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 NOX4Q9NPH5 578 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 DUX4Q9UBX2 424 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 OR14J1Q9UGF5 321 aa18.25■□□□□ 0.51
SRM-201ENST00000376957 MAGEB3O15480 346 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 CLIC3O95833 236 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 UBA52P62987 128 aaKnown RBP18.24■□□□□ 0.51
SRM-201ENST00000376957 ADARB1P78563 741 aaKnown RBP18.24■□□□□ 0.51
SRM-201ENST00000376957 BRD3OSQ6XYD6 125 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 VMO1Q7Z5L0 202 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.24■□□□□ 0.51
SRM-201ENST00000376957 RNF166Q96A37 237 aaPredicted RBP18.24■□□□□ 0.51
SRM-201ENST00000376957 TMEM80Q96HE8 168 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 OPALINQ96PE5 141 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 TBX15Q96SF7 602 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 ZCCHC4Q9H5U6 513 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 HES4Q9HCC6 221 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 ZNF222Q9UK12 451 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 MAB21L2Q9Y586 359 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 PCDHGB5Q9Y5G0 923 aa18.24■□□□□ 0.51
SRM-201ENST00000376957 IGHV1-69DA0A0B4J2H0 117 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 CENPVL3A0A0U1RRI6 287 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 EFCAB10A6NFE3 127 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 M0R1W7 72 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 ZFPL1O95159 310 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 IGHV1-69P01742 117 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 CD2P06729 351 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 CHRM2P08172 466 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 SELLP14151 372 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 ERVK11-1P61568 191 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 NCR3LG1Q68D85 454 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 RPL22L1Q6P5R6 122 aaKnown RBP18.23■□□□□ 0.51
SRM-201ENST00000376957 METAP1DQ6UB28 335 aaPredicted RBP18.23■□□□□ 0.51
SRM-201ENST00000376957 ZDHHC22Q8N966 263 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 SLAMF9Q96A28 289 aa18.23■□□□□ 0.51
SRM-201ENST00000376957 METTL8Q9H825 291 aaKnown RBP18.23■□□□□ 0.51
SRM-201ENST00000376957 DIMT1Q9UNQ2 313 aaKnown RBP18.23■□□□□ 0.51
SRM-201ENST00000376957 FAM96BQ9Y3D0 163 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms