RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 HS3ST3B1Q9Y662 390 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 FIGNL2A6NMB9 653 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 SCGNO76038 276 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 MPIG6BO95866 241 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 PRH1P02810 166 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 SEC11BP0C7V7 166 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 AMY2BP19961 511 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 DPPA2Q7Z7J5 298 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 MISP3Q96FF7 219 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 BANF2Q9H503 90 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 VSX1Q9NZR4 365 aaPredicted RBP11.34□□□□□ -0.59
MSH5-204ENST00000375755 A0A1W2PP11 408 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 RPL36A-HNRNPH2H7BZ11 118 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 HCRTR2O43614 444 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 SCGB1D2O95969 90 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 CCL4P13236 92 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 IL12BP29460 328 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 PLCXD2Q0VAA5 305 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 C1orf140Q5VVS0 124 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 KMT5CQ86Y97 462 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 CARFQ8N187 725 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 NUDT16L1Q9BRJ7 211 aaKnown RBP11.33□□□□□ -0.6
MSH5-204ENST00000375755 URGCP-MRPS24S4R325 110 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 EML6Q6ZMW3 1958 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 SPENQ96T58 3664 aaKnown RBP11.33□□□□□ -0.6
MSH5-204ENST00000375755 TSPAN2O60636 221 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 GSTP1P09211 210 aaKnown RBP11.33□□□□□ -0.6
MSH5-204ENST00000375755 SPCS3P61009 180 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 ELOBQ15370 118 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 HLA-DQA1Q5Y7H0 255 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 ANKRD37Q7Z713 158 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 SUMF2Q8NBJ7 301 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 APCDD1LQ8NCL9 501 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 RNASE11Q8TAA1 199 aaKnown RBP11.33□□□□□ -0.6
MSH5-204ENST00000375755 DAZLQ92904 295 aaKnown RBP11.33□□□□□ -0.6
MSH5-204ENST00000375755 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 ST6GALNAC5Q9BVH7 336 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 B3GALT5Q9Y2C3 310 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 CPAMD8Q8IZJ3 1885 aa11.33□□□□□ -0.6
MSH5-204ENST00000375755 ZNF587BE7ETH6 402 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 PPP1R2P9O14990 202 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 HEXBP07686 556 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 CHRM2P08172 466 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 SLC2A1P11166 492 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 FBXW4P57775 412 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 MRPL24Q96A35 216 aaKnown RBP11.32□□□□□ -0.6
MSH5-204ENST00000375755 ARHGAP5-AS1Q96IT6 56 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 OR11A1Q9GZK7 315 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 CENPMQ9NSP4 180 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 COPS7AQ9UBW8 275 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 FBLN5Q9UBX5 448 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 TGIF2-C20orf24A0A0A6YYL0 155 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 NUDT14O95848 222 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 IFNA10P01566 189 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 SERPINA2P20848 420 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 ZNF93P35789 620 aaPredicted RBP11.32□□□□□ -0.6
MSH5-204ENST00000375755 OR3A2P47893 321 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 ERVFRD-1P60508 538 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 MFSD8Q8NHS3 518 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 FNDC9Q8TBE3 224 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 RHBDD1Q8TEB9 315 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 RAB39BQ96DA2 213 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 C1orf147Q96MC9 270 aaPredicted RBP11.32□□□□□ -0.6
MSH5-204ENST00000375755 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 EHFQ9NZC4 300 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 TUBD1Q9UJT1 453 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 RARRES3Q9UL19 164 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 SRPK3Q9UPE1 567 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 A8MVM7 634 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 TTRP02766 147 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 PNLIPP16233 465 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 RBMXP38159 391 aaKnown RBP11.32□□□□□ -0.6
MSH5-204ENST00000375755 RNF4P78317 190 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 GLO1Q04760 184 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 TGIF2LXQ8IUE1 241 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 ZNF441Q8N8Z8 693 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 ATG101Q9BSB4 218 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 TXNIPQ9H3M7 391 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 FAM86C1Q9NVL1 165 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 C1orf123Q9NWV4 160 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 PISDQ9UG56 409 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 SUSD2Q9UGT4 822 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 TMED3Q9Y3Q3 217 aa11.32□□□□□ -0.6
MSH5-204ENST00000375755 TRAV36DV7A0A075B6V5 113 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 ZNF724A8MTY0 619 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 TSTD3H0UI37 97 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 H3BQ15 152 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 TRGC2P03986 189 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 FABP4P15090 132 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 CXCR1P25024 350 aa11.31□□□□□ -0.6
MSH5-204ENST00000375755 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 APOBEC1P41238 236 aaKnown RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 SUCLG1P53597 346 aaKnown RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 CSNK2A1P68400 391 aaPredicted RBP11.31□□□□□ -0.6
MSH5-204ENST00000375755 ACY1Q03154 408 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms