RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ATP5HO75947 161 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 APOL3O95236 402 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 OR2T7P0C7T2 308 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 CCL1P22362 96 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 MPZP25189 248 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 HTR1FP30939 366 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 SLC35E4Q6ICL7 350 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 C11orf42Q8N5U0 333 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 OR10H4Q8NGA5 316 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 OR2T27Q8NH04 317 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 TRMT10AQ8TBZ6 339 aaKnown RBP11.6□□□□□ -0.55
NELFE-201ENST00000375425 RORBQ92753 470 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 AJUBAQ96IF1 538 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 SSX3Q99909 188 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 RBM4BQ9BQ04 359 aaKnown RBP11.6□□□□□ -0.55
NELFE-201ENST00000375425 FAM234AQ9H0X4 552 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 MEGF9Q9H1U4 602 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 PPA2Q9H2U2 334 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
NELFE-201ENST00000375425 PRKDCP78527 4128 aaKnown RBP11.59□□□□□ -0.55
NELFE-201ENST00000375425 WNK1Q9H4A3 2382 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 FAM230AA0A1W2PPH8 454 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 METTL15A6NJ78 407 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 H3BUX3 64 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 SYT7O43581 403 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 TK1P04183 234 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 FCGR1AP12314 374 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 PAX6P26367 422 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 ATP6V1E1P36543 226 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 ERVK11-1P61568 191 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 IL24Q13007 206 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 UBE2V2Q15819 145 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 OR8J1Q8NGP2 316 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 RIBC2Q9H4K1 309 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 HEXA-AS1Q9H8Q6 139 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 OAZ3Q9UMX2 235 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 SLC7A11Q9UPY5 501 aa11.59□□□□□ -0.55
NELFE-201ENST00000375425 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 A0A1W2PR64 198 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 A0A1W2PRV1 198 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 SULT1C4O75897 302 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 CCL3L1P16619 93 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 ZNF273Q14593 569 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 LY6EQ16553 131 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 PPP1R35Q8TAP8 253 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 EME1Q96AY2 570 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 CENPNQ96H22 339 aaPredicted RBP11.58□□□□□ -0.56
NELFE-201ENST00000375425 ADI1Q9BV57 179 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 GABARAPL3Q9BY60 117 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 PKIBQ9C010 78 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 MMP27Q9H306 513 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 PLEKHA1Q9HB21 404 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 USE1Q9NZ43 259 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 MTCH1Q9NZJ7 389 aa11.58□□□□□ -0.56
NELFE-201ENST00000375425 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.58□□□□□ -0.56
NELFE-201ENST00000375425 IGKV1-27A0A075B6S5 117 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 F8VVB4 439 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 F8VWA3 439 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 K7N7A8 449 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 INMTO95050 263 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 PIPP12273 146 aaPredicted RBP11.57□□□□□ -0.56
NELFE-201ENST00000375425 LGALS4P56470 323 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 COL10A1Q03692 680 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 PDLIM3Q53GG5 364 aaPredicted RBP11.57□□□□□ -0.56
NELFE-201ENST00000375425 RDH10Q8IZV5 341 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 OSBPL10Q9BXB5 764 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 FBLN5Q9UBX5 448 aa11.57□□□□□ -0.56
NELFE-201ENST00000375425 GATBO75879 557 aaKnown RBP11.56□□□□□ -0.56
NELFE-201ENST00000375425 SERPINA3P01011 423 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 CHRM2P08172 466 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 COX7A1P24310 79 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 GABRA5P31644 462 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 BMXP51813 675 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 FUT6P51993 359 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 TMED1Q13445 227 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 AANATQ16613 207 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 LRRC75BQ2VPJ9 315 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 ZNF782Q6ZMW2 699 aaPredicted RBP11.56□□□□□ -0.56
NELFE-201ENST00000375425 PRSS35Q8N3Z0 413 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 ASCC1Q8N9N2 400 aaKnown RBP11.56□□□□□ -0.56
NELFE-201ENST00000375425 RFKQ969G6 155 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 UBE2FQ969M7 185 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 CEP19Q96LK0 163 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 GNG8Q9UK08 70 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 SIGLEC9Q9Y336 463 aa11.56□□□□□ -0.56
NELFE-201ENST00000375425 MEX3AA1L020 520 aaKnown RBP11.55□□□□□ -0.56
NELFE-201ENST00000375425 SAC3D1A6NKF1 404 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 ZNF737O75373 536 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 CDC42P60953 191 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 ZNF85Q03923 595 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 TP53I3Q53FA7 332 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 CRIP3Q6Q6R5 217 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 SLC25A26Q70HW3 274 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 EGFL6Q8IUX8 553 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 CCDC54Q8NEL0 328 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 TRUB1Q8WWH5 349 aaKnown RBP11.55□□□□□ -0.56
NELFE-201ENST00000375425 SLAMF9Q96A28 289 aa11.55□□□□□ -0.56
NELFE-201ENST00000375425 BORCS8Q96FH0 119 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms