RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GPR3P46089 330 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 PMP22Q01453 160 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ARHGEF39Q8N4T4 335 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ADPRHL1Q8NDY3 354 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 EXTL1Q92935 676 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 TOLLIPQ9H0E2 274 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 HIPK2Q9H2X6 1198 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 OR51I2Q9H344 312 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 KNTC1P50748 2209 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 TMEM218A2RU14 115 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 RECKO95980 971 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ASAH2BP0C7U1 165 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 INSM1Q01101 510 aaPredicted RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 STPG2Q8N412 459 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 OR5C1Q8NGR4 320 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 SLC39A7Q92504 469 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 HLA-CQ95604 372 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 HELZP42694 1942 aaKnown RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 CDRT15L2A8MXV6 281 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ENSAO43768 121 aaKnown RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 CRHP06850 196 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 KIR2DL1P43626 348 aaPredicted RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF154Q13106 437 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF660Q6AZW8 331 aaPredicted RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 NAT6Q93015 286 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ERGIC1Q969X5 290 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 MYOTQ9UBF9 498 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 WDR1O75083 606 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 DRAM2Q6UX65 266 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF610Q8N9Z0 462 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 RTL8AQ9BWD3 113 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 LIPT2A6NK58 231 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 FOXS1O43638 330 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 TMEM127O75204 238 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 TM4SF19Q96DZ7 209 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 PLPPR2Q96GM1 343 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF727A8MUV8 499 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 GEMIN2O14893 280 aaKnown RBP5.79□□□□□ -1.48
SMC1A-202ENST00000375340 NMBP08949 121 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 VSIG8P0DPA2 414 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 KITLGP21583 273 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 SSTP61278 116 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 CATR1Q13166 79 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 CEACAM16Q2WEN9 425 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 PIK3IP1Q96FE7 263 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 PILRAQ9UKJ1 303 aa5.79□□□□□ -1.48
SMC1A-202ENST00000375340 TMEM229AB2RXF0 380 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 IL9P15248 144 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CD46P15529 392 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 KCNJ3P48549 501 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 NOVA1P51513 510 aaKnown RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TAS2R30P59541 319 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 RAB35Q15286 201 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 RGS7BPQ6MZT1 257 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CLDN23Q96B33 292 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 RAB39BQ96DA2 213 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 PHYHIPLQ96FC7 376 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 ABCD4O14678 606 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 DSCR4P56555 118 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TMEM41BQ5BJD5 291 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 WIPI1Q5MNZ9 446 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TBC1D26Q86UD7 250 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 RPS19BP1Q86WX3 136 aaKnown RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 OR2I1PQ8NGU4 316 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 SMIM7Q9BQ49 75 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 PLXNA2O75051 1894 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TRBV5-5A0A0J9YX44 114 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 A0A1W2PQF6 199 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CRYBA1P05813 215 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CALCRP30988 508 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CCL11P51671 97 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 FUT6P51993 359 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 PLAC9Q5JTB6 97 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 ARRDC1Q8N5I2 433 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 SLC35G3Q8N808 338 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 OR10D4PQ8NGN7 298 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 OR13G1Q8NGZ3 307 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 MITD1Q8WV92 249 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TTC9Q92623 222 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 ARV1Q9H2C2 271 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TMEM100Q9NV29 134 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 THSD7BQ9C0I4 1608 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 PLXNA4Q9HCM2 1894 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 A0A1W2PPE2 198 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 LY86O95711 162 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 MUC1P15941 1255 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 SUMO3P55854 103 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 KCNE4Q8WWG9 221 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TRIB1Q96RU8 372 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 ZNF426Q9BUY5 554 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CEP250Q9BV73 2442 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 UPK3AO75631 287 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 TBX6O95947 436 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-202ENST00000375340 METTL15P1P0C7V9 234 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CTRB1P17538 263 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 CTRB2Q6GPI1 263 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 C19orf48Q6RUI8 117 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 LHX6Q9UPM6 363 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 IGKV1D-42A0A075B6H8 117 aa5.78□□□□□ -1.48
SMC1A-202ENST00000375340 IGHV1OR21-1A0A087WYE8 117 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms