RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IQCJQ1A5X6 159 aa10.71□□□□□ -0.7
C9orf3-203ENST00000375315 IAH1Q2TAA2 248 aaPredicted RBP10.71□□□□□ -0.7
C9orf3-203ENST00000375315 PRICKLE4Q2TBC4 344 aa10.71□□□□□ -0.7
C9orf3-203ENST00000375315 MRPL52Q86TS9 123 aaKnown RBP10.71□□□□□ -0.7
C9orf3-203ENST00000375315 THOC3Q96J01 351 aaKnown RBP10.71□□□□□ -0.7
C9orf3-203ENST00000375315 GINS3Q9BRX5 216 aa10.71□□□□□ -0.7
C9orf3-203ENST00000375315 SRA1Q9HD15 236 aaKnown RBP10.71□□□□□ -0.7
C9orf3-203ENST00000375315 PRRC2CQ9Y520 2896 aaKnown RBP10.7□□□□□ -0.7
C9orf3-203ENST00000375315 C17orf51A8MQB3 221 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 H0YL77 283 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 HSD17B6O14756 317 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 DEDDO75618 318 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 C1QL1O75973 258 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 SCAF4O95104 1147 aaKnown RBP10.7□□□□□ -0.7
C9orf3-203ENST00000375315 PNLIPP16233 465 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 ALOX5APP20292 161 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 FBLP22087 321 aaKnown RBP10.7□□□□□ -0.7
C9orf3-203ENST00000375315 GNALP38405 381 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 PAX5Q02548 391 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 GXYLT1Q4G148 440 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 DPY19L4Q7Z388 723 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 C8orf44Q96CB5 159 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 DUSP23Q9BVJ7 150 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 FOXD3Q9UJU5 478 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-203ENST00000375315 TCFL5Q9UL49 500 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 NUP210LQ5VU65 1888 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 IGHV5-10-1A0A0J9YXX1 117 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 ZNF264O43296 627 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 SCGNO76038 276 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 NSA2O95478 260 aaKnown RBP10.7□□□□□ -0.7
C9orf3-203ENST00000375315 FPR2P25090 351 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 LMO1P25800 156 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 P2RY1P47900 373 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 GABRA4P48169 554 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 SPEM2Q0P670 501 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 AARDQ4LEZ3 155 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 ARSJQ5FYB0 599 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-203ENST00000375315 ZNF550Q7Z398 422 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 SLC35E3Q7Z769 313 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 ZNF573Q86YE8 665 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 OR1P1Q8NH06 330 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 CMBLQ96DG6 245 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 SLC25A44Q96H78 314 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-203ENST00000375315 OTOGLQ3ZCN5 2332 aa10.7□□□□□ -0.7
C9orf3-203ENST00000375315 LY6G6EA0A0G2JKS1 128 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 B4DEV8 164 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 MASP2O00187 686 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 HSPA12AO43301 675 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 SCRG1O75711 98 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 FSTP19883 344 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 DNASE1L1P49184 302 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 SUPT4H1P63272 117 aaKnown RBP10.69□□□□□ -0.7
C9orf3-203ENST00000375315 ASPHD2Q6ICH7 369 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 FDX2Q6P4F2 183 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 ULK3Q6PHR2 472 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 POMZP3Q6PJE2 187 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 OR51A2Q8NGJ7 313 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 NEK7Q8TDX7 302 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 LSM5Q9Y4Y9 91 aaKnown RBP10.69□□□□□ -0.7
C9orf3-203ENST00000375315 U3KQA8 63 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 CEP250Q9BV73 2442 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 CCDC163A0A0D9SF12 145 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 FIGNL2A6NMB9 653 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 CHRM2P08172 466 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 PI3P19957 117 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 KLK2P20151 261 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 EFNA3P52797 238 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 APCDD1LQ8NCL9 501 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 ERGIC1Q969X5 290 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 ELOVL3Q9HB03 270 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 SLC22A13Q9Y226 551 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 LNP1A1A4G5 178 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 PCNX2A6NKB5 2137 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 CEACAM18A8MTB9 384 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 SRP19P09132 144 aaKnown RBP10.69□□□□□ -0.7
C9orf3-203ENST00000375315 CST2P09228 141 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 SPOCK1Q08629 439 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 C16orf52Q8NHV5 167 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 FNDC9Q8TBE3 224 aa10.69□□□□□ -0.7
C9orf3-203ENST00000375315 C19orf53Q9UNZ5 99 aaPredicted RBP10.69□□□□□ -0.7
C9orf3-203ENST00000375315 RALGAPA1Q6GYQ0 2036 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 TMEM210A6NLX4 147 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 A6NNC1 897 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 HAGHQ16775 308 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 VAX1Q5SQQ9 334 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 C1orf100Q5SVJ3 147 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 ZNF774Q6NX45 483 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 ASB5Q8WWX0 329 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 ZNF501Q96CX3 271 aaPredicted RBP10.68□□□□□ -0.7
C9orf3-203ENST00000375315 GPX7Q96SL4 187 aaPredicted RBP10.68□□□□□ -0.7
C9orf3-203ENST00000375315 C1orf123Q9NWV4 160 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 CLDN34H7C241 214 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 IFNA21P01568 189 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 SLC35E2P0CK97 266 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 PGA3P0DJD8 388 aa10.68□□□□□ -0.7
C9orf3-203ENST00000375315 IGFBP3P17936 291 aaPredicted RBP10.68□□□□□ -0.7
C9orf3-203ENST00000375315 RBMXP38159 391 aaKnown RBP10.68□□□□□ -0.7
C9orf3-203ENST00000375315 RPS27P42677 84 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms