RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 CDK5Q00535 292 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 ACVR1Q04771 509 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 VMA21Q3ZAQ7 101 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 MIDNQ504T8 468 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 CTGFP29279 349 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 PPP1CBP62140 327 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 TSPO2Q5TGU0 170 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 FA2HQ7L5A8 372 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 LINC01555Q8NAE3 123 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 OTOSQ8NHW6 89 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 DYNC2LI1Q8TCX1 351 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 TMEM37Q8WXS4 190 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 RAB18Q9NP72 206 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 GPR3P46089 330 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 PAX5Q02548 391 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 DGAT2L6Q6ZPD8 337 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 TSPAN32Q96QS1 320 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 TMEM147Q9BVK8 224 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
NOTCH4-201ENST00000375023 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 TAAR5O14804 337 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 OXA1LQ15070 435 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 SLC36A1Q7Z2H8 476 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 CDCA4Q9BXL8 241 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 PRDM7Q9NQW5 492 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 TRAPPC1Q9Y5R8 145 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 CD40P25942 277 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 CALCRP30988 508 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 DOK1Q99704 481 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 SFTA3P0C7M3 94 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 SFTPCP11686 197 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 FOXB2Q5VYV0 432 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 ZNF425Q6IV72 752 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 KCNMB2Q9Y691 235 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 ACTL6AO96019 429 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 USF1P22415 310 aaPredicted RBP13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 MAGEA5P43359 124 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 CEBPDP49716 269 aaPredicted RBP13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 DHODHQ02127 395 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 MYPOPQ86VE0 399 aaPredicted RBP13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 MYOZ1Q9NP98 299 aaPredicted RBP13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 OR5V1Q9UGF6 321 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 CSN3P07498 182 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 PNLIPP16233 465 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 CD1EP15812 388 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 CLDN20P56880 219 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 NKG7Q16617 165 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 SLC25A19Q9HC21 320 aa13.1□□□□□ -0.31
NOTCH4-201ENST00000375023 KIAA1324LA8MWY0 1029 aaPredicted RBP13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 NEURL1O76050 574 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 CCL4P13236 92 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 GNG3P63215 75 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 TMEM108Q6UXF1 575 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 THBS4P35443 961 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 CAMPP49913 170 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 FADS6Q8N9I5 356 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 HGDQ93099 445 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 PHOX2AO14813 284 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 SPP1P10451 314 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 HLXQ14774 488 aaPredicted RBP13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 TIPARPQ7Z3E1 657 aaKnown RBP13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 MVB12AQ96EY5 273 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 IL36GQ9NZH8 169 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 ITGB4P16144 1822 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 OR3A1P47881 315 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 CBLN3Q6UW01 205 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 OR10AC1Q8NH08 325 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 CIB3Q96Q77 187 aaPredicted RBP13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 FAM60AQ9NP50 221 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 WNT16Q9UBV4 365 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 FAM24AA6NFZ4 105 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 CHRNA7P36544 502 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 ECSCRQ19T08 205 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 ZNF429Q86V71 674 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 GSX2Q9BZM3 304 aa13.09□□□□□ -0.31
NOTCH4-201ENST00000375023 RABAC1Q9UI14 185 aa13.08□□□□□ -0.31
NOTCH4-201ENST00000375023 IGKV3D-11A0A0A0MRZ8 115 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 OR2M5A3KFT3 312 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 IGKV3-11P04433 115 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 FUT3P21217 361 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 ZNF628Q5EBL2 1059 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 NHLRC1Q6VVB1 395 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 DYRK2Q92630 601 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 RHOFQ9HBH0 211 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 PTPRZ1P23471 2315 aaPredicted RBP13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 IGHV1OR15-9A0A0B4J2B8 117 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 EPPINO95925 133 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 KLF3P57682 345 aaPredicted RBP13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 PRICKLE4Q2TBC4 344 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 Q6ZNX1 250 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 TTC9Q92623 222 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 HTN3P15516 51 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 BAP18Q8IXM2 172 aa13.08□□□□□ -0.32
NOTCH4-201ENST00000375023 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms