RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FAM90A10PA6NDY2 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A18PA6NE21 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A16PA6NEW6 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A20PA6NIJ5 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A8PA6NJQ4 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A7PA6NKC0 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 OR2AT4A6NND4 320 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A22PA8MWA6 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A12PA8MX19 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A5PA8MXJ8 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A23PA8MXZ1 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 G3V3Q6 166 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 MKRN2OSH3BPM6 223 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 TPOP07202 933 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A15PP0C7V4 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A13PP0C7W8 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A14PP0C7W9 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FAM90A24PP0C7X0 464 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 PTGER4P35408 488 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 PMELP40967 661 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 SNU13P55769 128 aaKnown RBP15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 RBM11P57052 281 aaKnown RBP15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FOXF2Q12947 444 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 MPPED2Q15777 294 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 TAF9Q16594 264 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 EIF2S3LQ2VIR3 472 aaKnown RBP15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 Q5BKY6 102 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 ELP2Q6IA86 826 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 NCCRP1Q6ZVX7 275 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 SLC25A26Q70HW3 274 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 TMED4Q7Z7H5 227 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 MYPOPQ86VE0 399 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 FBXL14Q8N1E6 418 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 C17orf78Q8N4C9 275 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 CDH20Q9HBT6 801 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 EDARQ9UNE0 448 aa15.47■□□□□ 0.07
HLA-DQB1-201ENST00000374943 CFAP47Q6ZTR5 3102 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 USP24Q9UPU5 2620 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 CHD8Q9HCK8 2581 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 OR5B21A6NL26 309 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 ANKRD30BLA7E2S9 258 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 K7EM74 188 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 SMPD2O60906 423 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 WDR1O75083 606 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 CGAP01215 116 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 CBR1P16152 277 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 DTYMKP23919 212 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 DNASE1P24855 282 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 NHLRC3Q5JS37 347 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 NKAPLQ5M9Q1 402 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 SEM1Q6ZVN7 128 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 OR11H4Q8NGC9 324 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 OR2T35Q8NGX2 323 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 TERB2Q8NHR7 220 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 OR5P3Q8WZ94 311 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 ST3GAL6Q9Y274 331 aa15.46■□□□□ 0.07
HLA-DQB1-201ENST00000374943 PRSS44E7EML9 344 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 GEMIN2O14893 280 aaKnown RBP15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ATP6V1G1O75348 118 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 IL2RAP01589 272 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 IGKV3-15P01624 115 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 CELA3BP08861 270 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 IDH3GP51553 393 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 GPM6AP51674 278 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 DHRS2Q13268 280 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PIGYQ3MUY2 71 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PLEKHN1Q494U1 663 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 LHFPL1Q86WI0 220 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 WDR31Q8NA23 367 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OR10AD1Q8NGE0 317 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OR5AP2Q8NGF4 316 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 STARD4Q96DR4 205 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HIST1H2AAQ96QV6 131 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ST6GALNAC5Q9BVH7 336 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 OBP2BQ9NPH6 170 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ITGB1BP2Q9UKP3 347 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 MGAT4AQ9UM21 535 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PROCRQ9UNN8 238 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 WASF3Q9UPY6 502 aa15.45■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZNF732B4DXR9 585 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 RRP8O43159 456 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 PDCD6O75340 191 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 ZBTB25P24278 435 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HOXC12P31275 282 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TAS2R31P59538 309 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 UBE2MP61081 183 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 P2RY6Q15077 328 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 KRTCAP3Q53RY4 240 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TMEM17Q86X19 198 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 MKXQ8IYA7 352 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 C12orf45Q8N5I9 185 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SCNM1Q9BWG6 230 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 FN3KRPQ9HA64 309 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 AK3Q9UIJ7 227 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HSPB11Q9Y547 144 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 APC2O95996 2303 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 MSTNO14793 375 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 TPD52L2O43399 206 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 SPINK2P20155 84 aa15.44■□□□□ 0.06
HLA-DQB1-201ENST00000374943 HAAOP46952 286 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms