RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SLAMF9Q96A28 289 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 C1orf159Q96HA4 380 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 CEP19Q96LK0 163 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 ZNF488Q96MN9 340 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 GPER1Q99527 375 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 MRPS26Q9BYN8 205 aaKnown RBP12.56□□□□□ -0.4
HSPG2-201ENST00000374673 ZNF665Q9H7R5 613 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 NLKQ9UBE8 527 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 DNAJB11Q9UBS4 358 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 STUB1Q9UNE7 303 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 CREBBPQ92793 2442 aa12.56□□□□□ -0.4
HSPG2-201ENST00000374673 ZNF469Q96JG9 3925 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-201ENST00000374673 IGHV3OR15-7A0A075B7D8 119 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 KDM4BO94953 1096 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 FGF9P31371 208 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-201ENST00000374673 SMIM21Q3B7S5 101 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 STUMQ69YW2 141 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 LRRTM1Q86UE6 522 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 SATL1Q86VE3 508 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 LYPD6Q86Y78 171 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 Q8IYB0 196 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 PNLDC1Q8NA58 520 aaKnown RBP12.55□□□□□ -0.4
HSPG2-201ENST00000374673 PXT1Q8NFP0 134 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 OR51F2Q8NH61 342 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 SLITRK2Q9H156 845 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 RHOFQ9HBH0 211 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 SMURF1Q9HCE7 757 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 MIOXQ9UGB7 285 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 PCDHB10Q9UN67 800 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
HSPG2-201ENST00000374673 IGKV1-12A0A0C4DH73 117 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 TRAPPC2LH3BP13 241 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 NXPH2O95156 264 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 IGKV1D-12P01611 117 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 GYPAP02724 150 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 WNT2P09544 360 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 TMEM225BP0DP42 221 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 RPS2P15880 293 aaKnown RBP12.54□□□□□ -0.4
HSPG2-201ENST00000374673 CD36P16671 472 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 ADRA2CP18825 462 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 GMFBP60983 142 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-201ENST00000374673 ASCL4Q6XD76 172 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 TNFAIP8L1Q8WVP5 186 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 SNTG1Q9NSN8 517 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
HSPG2-201ENST00000374673 OR2AT4A6NND4 320 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 FAM157AC9JC47 383 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 F8VVB4 439 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 F8VWA3 439 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 IGHV4-31P0DP07 118 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 CD37P11049 281 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 AMY2BP19961 511 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 BCL3P20749 454 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 CALRP27797 417 aaKnown RBP12.53□□□□□ -0.4
HSPG2-201ENST00000374673 PTGFRP43088 359 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 OR3A4PP47883 348 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 NPBWR2P48146 333 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 GZMKP49863 264 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 GLT8D1Q68CQ7 371 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 LYPD2Q6UXB3 125 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 JAGN1Q8N5M9 183 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 ANGPTL6Q8NI99 470 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 FOXRED1Q96CU9 486 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-201ENST00000374673 YIPF6Q96EC8 236 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 NEIL1Q96FI4 390 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-201ENST00000374673 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 OR51E2Q9H255 320 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 TXNL4BQ9NX01 149 aaKnown RBP12.53□□□□□ -0.4
HSPG2-201ENST00000374673 ZNF222Q9UK12 451 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 SSR3Q9UNL2 185 aa12.53□□□□□ -0.4
HSPG2-201ENST00000374673 IGKV1D-17A0A075B6S4 117 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 A8MXK9 166 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 KNG1P01042 644 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 SFTPBP07988 381 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 PSG2P11465 335 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 GADD45AP24522 165 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 KRTAP1-1Q07627 177 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 C22orf42Q6IC83 251 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 NLRC3Q7RTR2 1065 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 SLC36A1Q7Z2H8 476 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 C1QL2Q7Z5L3 287 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 FAM58AQ8N1B3 248 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 Q8NFD4 153 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 OR5T2Q8NGG2 359 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 OR8B3Q8NGG8 313 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 EMG1Q92979 244 aaKnown RBP12.52□□□□□ -0.41
HSPG2-201ENST00000374673 OR8B2Q96RD0 313 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-201ENST00000374673 FAM192AQ9GZU8 254 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 CNTD2Q9H8S5 307 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.41
HSPG2-201ENST00000374673 RBFOX1Q9NWB1 397 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms