RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 KRTAP27-1Q3LI81 207 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 NRN1LQ496H8 165 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 C9orf135Q5VTT2 229 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 ALKAL2Q6UX46 152 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 LHFPL2Q6ZUX7 228 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 TUSC5Q8IXB3 177 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 TMEM251Q8N6I4 163 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 PPP1R1CQ8WVI7 109 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 SLC7A10Q9NS82 523 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 GPR132Q9UNW8 380 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 AUP1Q9Y679 476 aa10.49□□□□□ -0.73
HMGCL-202ENST00000374487 TUBAL3A6NHL2 446 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 EEF1E1-BLOC1S5C9J1V9 151 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF708P17019 499 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 CCNOP22674 350 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 FAM3AP98173 230 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 SRSF4Q08170 494 aaKnown RBP10.48□□□□□ -0.73
HMGCL-202ENST00000374487 C11orf87Q6NUJ2 197 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 TMEM65Q6PI78 240 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 NAXEQ8NCW5 288 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 OR5AP2Q8NGF4 316 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 COQ8AQ8NI60 647 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 FNDC9Q8TBE3 224 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 Q96M66 194 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 PPA2Q9H2U2 334 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 C5orf66Q9H5L9 145 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF552Q9H707 407 aaPredicted RBP10.48□□□□□ -0.73
HMGCL-202ENST00000374487 KIF25Q9UIL4 384 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 DOCK10Q96BY6 2186 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 A0A096LPE4 126 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 A0A0D9SG52 128 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 A0A1W2PPZ6 126 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF587BE7ETH6 402 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 KLRC4-KLRK1H3BQV0 150 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 I3L521 148 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 XRCC2O43543 280 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 B3GALNT1O75752 331 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 SP1P08047 785 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 MMP7P09237 267 aaPredicted RBP10.48□□□□□ -0.73
HMGCL-202ENST00000374487 RRASP10301 218 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 PI3P19957 117 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 FPR2P25090 351 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 ATP1B3P54709 279 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 BAMBIQ13145 260 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 TAF9Q16594 264 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 RFPL4BQ6ZWI9 263 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 SLC51BQ86UW2 128 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 TMEM185AQ8NFB2 350 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 OR6K3Q8NGY3 331 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 THAP6Q8TBB0 222 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 SCARB1Q8WTV0 552 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 PIGCQ92535 297 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 LINC00470Q9BZP3 86 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 RDH8Q9NYR8 311 aa10.48□□□□□ -0.73
HMGCL-202ENST00000374487 KLF13Q9Y2Y9 288 aaPredicted RBP10.48□□□□□ -0.73
HMGCL-202ENST00000374487 IGKV1-27A0A075B6S5 117 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 hCG_38984A0A1B0GV85 526 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 MKRN2OSH3BPM6 223 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 CA11O75493 328 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 CEACAM4O75871 244 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 SPDEFO95238 335 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 MEOX1P50221 254 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 FUT6P51993 359 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 ARPC4P59998 168 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 PPIAP62937 165 aaKnown RBP10.47□□□□□ -0.73
HMGCL-202ENST00000374487 ATXN7L3Q14CW9 347 aaPredicted RBP10.47□□□□□ -0.73
HMGCL-202ENST00000374487 TOR2AQ5JU69 321 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 PLCXD3Q63HM9 321 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 MOB3CQ70IA8 216 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 MCEMP1Q8IX19 187 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF100Q8IYN0 542 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 CPEB3Q8NE35 698 aaKnown RBP10.47□□□□□ -0.73
HMGCL-202ENST00000374487 OR13G1Q8NGZ3 307 aa10.47□□□□□ -0.73
HMGCL-202ENST00000374487 ZNF816-ZNF321PA0A0X1KG74 233 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 CEACAM18A8MTB9 384 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 SLC25A4P12235 298 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 RELNP78509 3460 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 AADACL3Q5VUY0 350 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 TMEM42Q69YG0 159 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 RPUSD3Q6P087 351 aaKnown RBP10.46□□□□□ -0.73
HMGCL-202ENST00000374487 OVCH2Q7RTZ1 564 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 CCDC28AQ8IWP9 274 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 INO80EQ8NBZ0 244 aaPredicted RBP10.46□□□□□ -0.73
HMGCL-202ENST00000374487 ANGPTL6Q8NI99 470 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 EMG1Q92979 244 aaKnown RBP10.46□□□□□ -0.73
HMGCL-202ENST00000374487 APH1AQ96BI3 265 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 WBP1Q96G27 269 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 FAAP24Q9BTP7 215 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 C1QTNF5Q9BXJ0 243 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 PRDM14Q9GZV8 571 aa10.46□□□□□ -0.73
HMGCL-202ENST00000374487 KANTRA0A1W2PQU2 76 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 NME2P1O60361 137 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 OR2F2O95006 317 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 SFT2D2O95562 160 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 HLA-HP01893 362 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 CD46P15529 392 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 NME2P22392 152 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 MPGP29372 298 aa10.46□□□□□ -0.74
HMGCL-202ENST00000374487 SERPINF1P36955 418 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms