RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 OR4A16Q8NH70 328 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 ARV1Q9H2C2 271 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 PATZ1Q9HBE1 687 aaKnown RBP8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 MUC6Q6W4X9 2439 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 UMAD1C9J7I0 102 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 H0Y8G0 127 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 TGFBR3LH3BV60 316 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 AQP8O94778 261 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 CSF2RBP32927 897 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 NOVA1P51513 510 aaKnown RBP8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 ZNF83P51522 516 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 DSCR4P56555 118 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 RPL19P84098 196 aaKnown RBP8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 CATR1Q13166 79 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 MSMO1Q15800 293 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 MITD1Q8WV92 249 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 LINC00052Q96N35 136 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 SOX7Q9BT81 388 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 UNKLQ9H9P5 680 aaKnown RBP8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 NIT2Q9NQR4 276 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 CXorf51AA0A1B0GTR3 108 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 LIPT2A6NK58 231 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 SNRPGP15A8MWD9 76 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 GPR31O00270 319 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 RAMP1O60894 148 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 HLA-DQB1P01920 261 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 OR5AC1P0C628 307 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 VSIG8P0DPA2 414 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 AADACP22760 399 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 ZNF133P52736 654 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 F2RL1P55085 397 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 ZDHHC23Q8IYP9 409 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 DUSP18Q8NEJ0 188 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 CADM4Q8NFZ8 388 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 ZNF721Q8TF20 911 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 ISOC2Q96AB3 205 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 MS4A3Q96HJ5 214 aa8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 NXF2Q9GZY0 626 aaKnown RBP8.04□□□□□ -1.12
SMARCA1-202ENST00000371122 ANKRD20A5PA0PJZ0 165 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 EFEMP2O95967 443 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 CD37P11049 281 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 LIMS1P48059 325 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 POLR2GP62487 172 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 OR2F1Q13607 317 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 HES1Q14469 280 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 CDC20BQ86Y33 519 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 NIPSNAP3BQ9BS92 247 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 DUSP15Q9H1R2 295 aaPredicted RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 PLEKHF2Q9H8W4 249 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 ZNF355PQ9NSJ1 428 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 PCOLCE2Q9UKZ9 415 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 C9orf170A2RU37 121 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 GPR37O15354 613 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 UPK3AO75631 287 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 MPC2O95563 127 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 GLULP15104 373 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 TMEM267Q0VDI3 215 aaPredicted RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 RAB31Q13636 194 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 TMEM255AQ5JRV8 349 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 PLAC9Q5JTB6 97 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 HES3Q5TGS1 186 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 OR11H4Q8NGC9 324 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 C2orf50Q96LR7 162 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 RCL1Q9Y2P8 373 aaKnown RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 LOC101059948A0A1B0GTJ6 334 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 CDRT15L2A8MXV6 281 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 MGST1P10620 155 aaKnown RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 TNFSF4P23510 183 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 GABRA4P48169 554 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 ATP1A1-AS1Q5TC04 95 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 HIST2H3AQ71DI3 136 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 C1orf210Q8IVY1 113 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 LHX4Q969G2 390 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 HES7Q9BYE0 225 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 TGIF2Q9GZN2 237 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 ZFP64Q9NPA5 681 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 AMDHD2Q9Y303 409 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 A0A0J9YW62 118 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 A0A1W2PRD5 423 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 A0A1W2PRF3 423 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 A0A1W2PRM7 423 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 SPINK4O60575 86 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 AGFG2O95081 481 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 LINC00271P0C7V0 271 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 ADRA2CP18825 462 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 KIAA0141Q14154 515 aaPredicted RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 HIKESHIQ53FT3 197 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 RPUSD3Q6P087 351 aaKnown RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 D2HGDHQ8N465 521 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 C9orf62Q8N4C0 152 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 OR2Z1Q8NG97 314 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 OR5AP2Q8NGF4 316 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 RGP1Q92546 391 aaPredicted RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 TM4SF19Q96DZ7 209 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 MALSU1Q96EH3 234 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 MED30Q96HR3 178 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 SDHCQ99643 169 aaPredicted RBP8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 GDF15Q99988 308 aa8.03□□□□□ -1.12
SMARCA1-202ENST00000371122 PIGMQ9H3S5 423 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms