RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 MTCH1Q9NZJ7 389 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 PCDHB10Q9UN67 800 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 TRAV1-2A0A0B4J238 106 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 NXPH2O95156 264 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 TMEM225BP0DP42 221 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 FOSL1P15407 271 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 MYL9P24844 172 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 RBMXP38159 391 aaKnown RBP13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 PSMD7P51665 324 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 GLT8D1Q68CQ7 371 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 LRRTM1Q86UE6 522 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 JAGN1Q8N5M9 183 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 DEFB108BQ8NET1 73 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 OR5D18Q8NGL1 313 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 TNFAIP8L1Q8WVP5 186 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 SLAMF9Q96A28 289 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 C18orf12Q96KH6 178 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 DNTTIP1Q9H147 329 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 SMURF1Q9HCE7 757 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 EXOSC4Q9NPD3 245 aaKnown RBP13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 NLKQ9UBE8 527 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 MIOXQ9UGB7 285 aa13.01□□□□□ -0.33
PRPF38B-202ENST00000370022 WNT9BO14905 357 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 SPRY1O43609 319 aaPredicted RBP13□□□□□ -0.33
PRPF38B-202ENST00000370022 KDM4BO94953 1096 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 PTGFRP43088 359 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 BMXP51813 675 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 C22orf42Q6IC83 251 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 FIP1L1Q6UN15 594 aaKnown RBP13□□□□□ -0.33
PRPF38B-202ENST00000370022 ASCL4Q6XD76 172 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 ACP7Q6ZNF0 438 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 NLRC3Q7RTR2 1065 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 LYPD6Q86Y78 171 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 C19orf18Q8NEA5 215 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 OR13F1Q8NGS4 319 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 YIPF6Q96EC8 236 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 S100A13Q99584 98 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 TMUB1Q9BVT8 246 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 FAM192AQ9GZU8 254 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 WDR13Q9H1Z4 485 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 NARFLQ9H6Q4 476 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 ZNF665Q9H7R5 613 aa13□□□□□ -0.33
PRPF38B-202ENST00000370022 PATZ1Q9HBE1 687 aaKnown RBP13□□□□□ -0.33
PRPF38B-202ENST00000370022 TXNL4BQ9NX01 149 aaKnown RBP13□□□□□ -0.33
PRPF38B-202ENST00000370022 OR2AT4A6NND4 320 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 CEACAM18A8MTB9 384 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 PDCD5O14737 125 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 ZNF780AO75290 641 aaPredicted RBP12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 KNG1P01042 644 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 IGHV2-5P01817 119 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 CD37P11049 281 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 CD99P14209 185 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 ADRA2CP18825 462 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 GADD45AP24522 165 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 RANBP1P43487 201 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 GMFBP60983 142 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 LMO4P61968 165 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 ATPAF1Q5TC12 328 aaPredicted RBP12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 STUMQ69YW2 141 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 RNF144BQ7Z419 303 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 CIARTQ8N365 385 aaPredicted RBP12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 ZNF488Q96MN9 340 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 OR51E2Q9H255 320 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 KAAG1Q9UBP8 84 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 AKAP9Q99996 3911 aa12.99□□□□□ -0.33
PRPF38B-202ENST00000370022 IGHV3OR15-7A0A075B7D8 119 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 IGKV1-12A0A0C4DH73 117 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 TNFRSF13BO14836 293 aaPredicted RBP12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 ANGPTL7O43827 346 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 IGKV1D-12P01611 117 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 TFAP2AP05549 437 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 WNT2P09544 360 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 RPS2P15880 293 aaKnown RBP12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 OR3A4PP47883 348 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 MTNR1BP49286 362 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 GPR176Q14439 515 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 ELP2Q6IA86 826 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 SLC36A1Q7Z2H8 476 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 EMG1Q92979 244 aaKnown RBP12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 NEIL1Q96FI4 390 aaPredicted RBP12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 KCTD7Q96MP8 289 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 CHCHD6Q9BRQ6 235 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 METTL9Q9H1A3 318 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 CNTD2Q9H8S5 307 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 SEBOXQ9HB31 216 aaPredicted RBP12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 IL36GQ9NZH8 169 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 GHRLQ9UBU3 117 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 SCOCQ9UIL1 159 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 VPS13CQ709C8 3753 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 OTOGQ6ZRI0 2925 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 F5H0A9 414 aaPredicted RBP12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 GYPAP02724 150 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 BCL3P20749 454 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 NPBWR2P48146 333 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 ALDH3B2P48448 385 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 RSU1Q15404 277 aa12.98□□□□□ -0.33
PRPF38B-202ENST00000370022 TMEM249Q2WGJ8 235 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms