RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 AKR1C2P52895 323 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 CARD18P57730 90 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 FAM3AP98173 230 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 AKR1C1Q04828 323 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 HFEQ30201 348 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 ZNF774Q6NX45 483 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 BTNL8Q6UX41 500 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 WDR5BQ86VZ2 330 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 ZNF837Q96EG3 531 aaPredicted RBP12.43□□□□□ -0.42
CD48-201ENST00000368045 NRIP2Q9BQI9 281 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 HDHD3Q9BSH5 251 aaPredicted RBP12.43□□□□□ -0.42
CD48-201ENST00000368045 TLNRD1Q9H1K6 362 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 TIMM10BQ9Y5J6 103 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 FAM230AA0A1W2PPH8 454 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 G3V3Y1 287 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 MSTNO14793 375 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 MED6O75586 246 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 NRASP01111 189 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 LCATP04180 440 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 P04436 131 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 HEXAP06865 529 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 PVALBP20472 110 aaPredicted RBP12.43□□□□□ -0.42
CD48-201ENST00000368045 FCGR2CP31995 323 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 FUT6P51993 359 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 UCP3P55916 312 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 OR8B8Q15620 311 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 TAF9Q16594 264 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 ABLIM2Q6H8Q1 611 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 AAED1Q7RTV5 226 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 ESX1Q8N693 406 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 FAAP24Q9BTP7 215 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 CRLF2Q9HC73 371 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
CD48-201ENST00000368045 SLC7A11Q9UPY5 501 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 IGKV1-27A0A075B6S5 117 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 ZNF716A6NP11 495 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 ZNF850A8MQ14 1090 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 E5RGE8 158 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 LPAR6P43657 344 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 HTR5AP47898 357 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 F2RL1P55085 397 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 PIGPP57054 158 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
CD48-201ENST00000368045 SPEM2Q0P670 501 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 CHAF1BQ13112 559 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 TMEM187Q14656 261 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 ABCA11PQ4W5N1 156 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 RAB11FIP2Q7L804 512 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 OSR2Q8N2R0 312 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 COMMD1Q8N668 190 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 UBAC2Q8NBM4 344 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 OR2AE1Q8NHA4 323 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 MRPL24Q96A35 216 aaKnown RBP12.42□□□□□ -0.42
CD48-201ENST00000368045 ZNF775Q96BV0 537 aaPredicted RBP12.42□□□□□ -0.42
CD48-201ENST00000368045 ARV1Q9H2C2 271 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 HRH4Q9H3N8 390 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 ZNF286AQ9HBT8 521 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 FSCN3Q9NQT6 498 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 FBXL17Q9UF56 701 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 NSG2Q9Y328 171 aa12.42□□□□□ -0.42
CD48-201ENST00000368045 MRPS18CQ9Y3D5 142 aaKnown RBP12.42□□□□□ -0.42
CD48-201ENST00000368045 KLF2Q9Y5W3 355 aaPredicted RBP12.42□□□□□ -0.42
CD48-201ENST00000368045 hCG_38984A0A1B0GV85 526 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 H7C1Q1 480 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 ANGPTL7O43827 346 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 FBXO24O75426 580 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 CD5P06127 495 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 MUC1P15941 1255 aaPredicted RBP12.41□□□□□ -0.42
CD48-201ENST00000368045 ZNF32P17041 273 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 HGFACQ04756 655 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 GPR157Q5UAW9 335 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 OR2A2Q6IF42 318 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 GGNQ86UU5 652 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 OR14L1PQ8NHC6 308 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 LYPD6BQ8NI32 183 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 SYT3Q9BQG1 590 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 SULT4A1Q9BR01 284 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 ATPIF1Q9UII2 106 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 AMDHD2Q9Y303 409 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 RNASEK-C17orf49H0YIS7 233 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 XRCC2O43543 280 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 SPRY1O43609 319 aaPredicted RBP12.41□□□□□ -0.42
CD48-201ENST00000368045 GDF9O60383 454 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 PDCD6O75340 191 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 CCL4P13236 92 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 TMEM33P57088 247 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 NRN1LQ496H8 165 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 PEAR1Q5VY43 1037 aaPredicted RBP12.41□□□□□ -0.42
CD48-201ENST00000368045 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 FOXRED2Q8IWF2 684 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 UBALD2Q8IYN6 164 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 RTN4IP1Q8WWV3 396 aaPredicted RBP12.41□□□□□ -0.42
CD48-201ENST00000368045 ADGRG7Q96K78 797 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 FOXB1Q99853 325 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 OR2H1Q9GZK4 316 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 WNT5BQ9H1J7 359 aa12.41□□□□□ -0.42
CD48-201ENST00000368045 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms