RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 BAIAP2L2Q6UXY1 529 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 ZNF429Q86V71 674 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 ASCC1Q8N9N2 400 aaKnown RBP11.42□□□□□ -0.58
VAMP4-202ENST00000367740 OR8J3Q8NGG0 315 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 C4orf3Q8WVX3 66 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 PGAM5Q96HS1 289 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 HIST1H2AAQ96QV6 131 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 NRIP2Q9BQI9 281 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 TRBV4-1A0A0J9YWV2 114 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 A0A1W2PRQ8 180 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 FAM220BPB1ANY3 271 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 ZNF737O75373 536 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 IGHG2P01859 326 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 CYLC2Q14093 348 aaPredicted RBP11.41□□□□□ -0.58
VAMP4-202ENST00000367740 DGCR6Q14129 220 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 SRSF7Q16629 238 aaKnown RBP eCLIP11.41□□□□□ -0.58
VAMP4-202ENST00000367740 CEACAM21Q3KPI0 293 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 SLC35F1Q5T1Q4 408 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 ASPHD1Q5U4P2 390 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 GDPD3Q7L5L3 318 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 BATF2Q8N1L9 274 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 RNF152Q8N8N0 203 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 TSPEARQ8WU66 669 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 C7orf26Q96N11 449 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 SH3GL1Q99961 368 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 HES4Q9HCC6 221 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 CD300AQ9UGN4 299 aa11.41□□□□□ -0.58
VAMP4-202ENST00000367740 LINC01548A6NM66 108 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 LEUTXA8MZ59 168 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 ZNF593O00488 134 aaPredicted RBP11.4□□□□□ -0.58
VAMP4-202ENST00000367740 SLC25A17O43808 307 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 NXPH2O95156 264 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 APOC1P02654 83 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 H1F0P07305 194 aaKnown RBP11.4□□□□□ -0.58
VAMP4-202ENST00000367740 MEF2CQ06413 473 aaPredicted RBP11.4□□□□□ -0.58
VAMP4-202ENST00000367740 IFI44LQ53G44 452 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 CXorf66Q5JRM2 361 aaPredicted RBP11.4□□□□□ -0.58
VAMP4-202ENST00000367740 TEX30Q5JUR7 227 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 TPTE2P1Q5T6R2 138 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 KRT74Q7RTS7 529 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 FOXRED2Q8IWF2 684 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 ABHD12Q8N2K0 398 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 ZNF511Q8NB15 262 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 OR11H1Q8NG94 326 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 OR2T4Q8NH00 348 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 RNF133Q8WVZ7 376 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 SLC22A13Q9Y226 551 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 LINC00312Q9Y6C7 94 aa11.4□□□□□ -0.58
VAMP4-202ENST00000367740 hADV38S2A0JD32 116 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A18PA6NE21 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A16PA6NEW6 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A20PA6NIJ5 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 OR5B21A6NL26 309 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A12PA8MX19 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A5PA8MXJ8 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FGF16O43320 207 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 IDH3BO43837 385 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 NOS1APO75052 506 aaPredicted RBP11.39□□□□□ -0.59
VAMP4-202ENST00000367740 ZNF682O95780 498 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 LY6G6CO95867 125 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A15PP0C7V4 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A13PP0C7W8 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A14PP0C7W9 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM90A24PP0C7X0 464 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FOXE3Q13461 319 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 EDDM3AQ14507 147 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 PNLIPRP3Q17RR3 467 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 OR8H2Q8N162 312 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 TPRX1Q8N7U7 411 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 ZNF596Q8TC21 504 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 HSH2DQ96JZ2 352 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 AMELYQ99218 206 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 VIPAS39Q9H9C1 493 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 ENPP4Q9Y6X5 453 aa11.39□□□□□ -0.59
VAMP4-202ENST00000367740 FAM172BPA6NC97 362 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 ARRDC5A6NEK1 342 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 A8MZ25 164 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 LY6LH3BQJ8 138 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 PSMD9O00233 223 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 SAP30O75446 220 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 POU3F4P49335 361 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 GPR50Q13585 617 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 FAM71E2Q8N5Q1 922 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 FAM86B1Q8N7N1 296 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 OR2T12Q8NG77 320 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 OR5A2Q8NGI9 324 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 FUZQ9BT04 418 aa11.38□□□□□ -0.59
VAMP4-202ENST00000367740 KRCC1Q9NPI7 259 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-202ENST00000367740 BUB1B-PAK6H3BSN5 160 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 J3QT63 122 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 IFNA6P05013 189 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 GYPBP06028 91 aa11.37□□□□□ -0.59
VAMP4-202ENST00000367740 ELANEP08246 267 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms