RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SKP2Q13309 424 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 RPEL1Q2QD12 228 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 B3GNTL1Q67FW5 361 aaPredicted RBP13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 TEX29Q8N6K0 151 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 GPR137Q96N19 417 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 OR5AL1P0C617 328 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 GLCCI1Q86VQ1 547 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 DOK5Q9P104 306 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 YBX2Q9Y2T7 364 aaKnown RBP13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 KCNE3Q9Y6H6 103 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 HIST1H1DP16402 221 aaKnown RBP13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 ORM2P19652 201 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 HNRNPA3P51991 378 aaKnown RBP13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 GAMTQ14353 236 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 SPINK14Q6IE38 97 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 ETV3LQ6ZN32 361 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 ORAI1Q96D31 301 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 TMEM215Q68D42 235 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 ZDHHC22Q8N966 263 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 TCRBV5S2A0A599 114 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 GNG7O60262 68 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 IL9P15248 144 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 ACP1P24666 158 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 TIGD3Q6B0B8 471 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 ID1P41134 155 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 MRPS11P82912 194 aaKnown RBP13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 GUCA2AQ02747 115 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 ZNF429Q86V71 674 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 SLC7A10Q9NS82 523 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 OR3A1P47881 315 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 SLC25A35Q3KQZ1 300 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 C20orf196Q8IYI0 205 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 PTPMT1Q8WUK0 201 aaPredicted RBP13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 SMIM4Q8WVI0 70 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 ARHGAP5-AS1Q96IT6 56 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 SH2D2AQ9NP31 389 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 DNPH1O43598 174 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 IGHA1P01876 353 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 IGHA2P01877 340 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 CCL2P13500 99 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 MMP15P51511 669 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 ZXDAP98168 799 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 FOXO1Q12778 655 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 RASL12Q9NYN1 266 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 ZNF230Q9UIE0 474 aaPredicted RBP13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 SIGLEC14Q08ET2 396 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 SLC16A12Q6ZSM3 486 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 COMMD1Q8N668 190 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 DNAJB12Q9NXW2 375 aaKnown RBP13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 MYH10P35580 1976 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 TOPAZ1Q8N9V7 1692 aa13.97□□□□□ -0.17
NUCKS1-201ENST00000367142 TAGLNQ01995 201 aaKnown RBP13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 KCNMB1Q16558 191 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 PDPNQ86YL7 162 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 ZNF441Q8N8Z8 693 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 SLC25A40Q8TBP6 338 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 PTP4A1Q93096 173 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 PWWP2BQ6NUJ5 590 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 DHRS11Q6UWP2 260 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 TSPAN32Q96QS1 320 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 RNF7Q9UBF6 113 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 CDC34P49427 236 aaPredicted RBP13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 HERVK_113P61574 105 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 ATP6V1FQ16864 119 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 WDR38Q5JTN6 314 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 OR52B4Q8NGK2 314 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 NUDT16L1Q9BRJ7 211 aaKnown RBP13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 NAT8BQ9UHF3 227 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 PDCD6O75340 191 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 ZNF273Q14593 569 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 PRICKLE4Q2TBC4 344 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 RELL2Q8NC24 303 aaPredicted RBP13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 DERL3Q96Q80 235 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 C20orf141Q9NUB4 165 aa13.96□□□□□ -0.17
NUCKS1-201ENST00000367142 NKG7Q16617 165 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 FAAP24Q9BTP7 215 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 OOEPA6NGQ2 149 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 SOX15O60248 233 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 GP1BAP07359 652 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 HTN1P15515 57 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 B4GALNT1Q00973 533 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 MOGAT2Q3SYC2 334 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 DEGS2Q6QHC5 323 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 RIMKLAQ8IXN7 391 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 ANGPTL6Q8NI99 470 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 AP5S1Q9NUS5 200 aa13.96□□□□□ -0.18
NUCKS1-201ENST00000367142 SMAGPQ0VAQ4 97 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 TMEM179BQ7Z7N9 219 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 TMEM116Q8NCL8 245 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 OR2I1PQ8NGU4 316 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 VAMP8Q9BV40 100 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 CCL21O00585 134 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 CRISP2P16562 243 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 SP6Q3SY56 376 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 PIK3IP1Q96FE7 263 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms