RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 GSN-AS1Q9NRJ2 163 aa11.15□□□□□ -0.62
CAPN8-201ENST00000366872 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
CAPN8-201ENST00000366872 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
CAPN8-201ENST00000366872 PIGLQ9Y2B2 252 aa11.15□□□□□ -0.62
CAPN8-201ENST00000366872 LSM5Q9Y4Y9 91 aaKnown RBP11.15□□□□□ -0.62
CAPN8-201ENST00000366872 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.62
CAPN8-201ENST00000366872 A0A087WWC5 75 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 IGHV3-20A0A0C4DH32 117 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 AP4M1O00189 453 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 MSTNO14793 375 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 SGCEO43556 437 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 LTBRP36941 435 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 CLINT1Q14677 625 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 KRTAP27-1Q3LI81 207 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 NKAIN1Q4KMZ8 207 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 TMEM42Q69YG0 159 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 Q6ZS49 121 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 C6orf201Q7Z4U5 140 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 OR4D5Q8NGN0 318 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 SPACA9Q96E40 222 aaPredicted RBP11.15□□□□□ -0.63
CAPN8-201ENST00000366872 MESP1Q9BRJ9 268 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 RSRP1Q9BUV0 290 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 SPACA1Q9HBV2 294 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 WFDC1Q9HC57 220 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 ATXN7L1Q9ULK2 861 aaPredicted RBP11.15□□□□□ -0.63
CAPN8-201ENST00000366872 LAMA3Q16787 3333 aa11.15□□□□□ -0.63
CAPN8-201ENST00000366872 DUXBA0A1W2PPF3 345 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 AGPAT2O15120 278 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 MMP9P14780 707 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 FAHP16930 419 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 CRYGSP22914 178 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 EIF2S3P41091 472 aaKnown RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 SULT1A1P50225 295 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 COL19A1Q14993 1142 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 SHBQ15464 509 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 LHFPL2Q6ZUX7 228 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 CPEB2Q7Z5Q1 589 aaKnown RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 TMEM123Q8N131 208 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 TMEM156Q8N614 296 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 RTN4IP1Q8WWV3 396 aaPredicted RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 LIN37Q96GY3 246 aaPredicted RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 TECTBQ96PL2 329 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 TMPRSS5Q9H3S3 457 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 KCNJ16Q9NPI9 418 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 KNL1Q8NG31 2342 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 NSG1A0A0A6YYJ2 146 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 M0R135 149 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 DNPH1O43598 174 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 IFNA17P01571 189 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 TMEM225BP0DP42 221 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 PNLIPP16233 465 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 ZNF14P17017 642 aaPredicted RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 MRPS34P82930 218 aaKnown RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 ZNF266Q14584 549 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 FAM27BQ5VT28 67 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 WDSUB1Q8N9V3 476 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 OR10G3Q8NGC4 313 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 NANPQ8TBE9 248 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 MAFIPQ8WZ33 124 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 ZNF799Q96GE5 643 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 LIME1Q9H400 295 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 C19orf25Q9UFG5 118 aaPredicted RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 AK3Q9UIJ7 227 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 FOXD3Q9UJU5 478 aaPredicted RBP11.14□□□□□ -0.63
CAPN8-201ENST00000366872 MTCH2Q9Y6C9 303 aa11.14□□□□□ -0.63
CAPN8-201ENST00000366872 TNRC6BQ9UPQ9 1833 aaKnown RBP11.13□□□□□ -0.63
CAPN8-201ENST00000366872 A0A1W2PNR3 127 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 DHHO43323 396 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 OR5AC1P0C628 307 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 ID4P47928 161 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 CLDN17P56750 224 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 CARD17Q5XLA6 110 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 ZNF385CQ66K41 422 aaPredicted RBP11.13□□□□□ -0.63
CAPN8-201ENST00000366872 FOXRED2Q8IWF2 684 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 OR5D18Q8NGL1 313 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 SLC2A9Q9NRM0 540 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 ZDHHC8Q9ULC8 765 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.13□□□□□ -0.63
CAPN8-201ENST00000366872 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.13□□□□□ -0.63
CAPN8-201ENST00000366872 CLEC18AA5D8T8 446 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 TP53I11O14683 189 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 PITX3O75364 302 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 SNRNP70P08621 437 aaKnown RBP11.13□□□□□ -0.63
CAPN8-201ENST00000366872 CD63P08962 238 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 OR8U8P0C7N1 319 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 RND3P61587 244 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 RAB35Q15286 201 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 HIKESHIQ53FT3 197 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 DNLZQ5SXM8 178 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 TMEM211Q6ICI0 200 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 DPPA3Q6W0C5 159 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 GALNTL5Q7Z4T8 443 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 CLEC18CQ8NCF0 446 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 RLN3Q8WXF3 142 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 IP6K3Q96PC2 410 aa11.13□□□□□ -0.63
CAPN8-201ENST00000366872 EML6Q6ZMW3 1958 aa11.12□□□□□ -0.63
CAPN8-201ENST00000366872 A0A1W2PPH5 198 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms