RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ROBO4Q8WZ75 1007 aa9.98□□□□□ -0.81
CDC42BPA-205ENST00000366769 NYNRINQ9P2P1 1898 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-205ENST00000366769 PARP14Q460N5 1801 aa9.98□□□□□ -0.81
CDC42BPA-205ENST00000366769 CLDN16Q9Y5I7 305 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 B4DEV8 164 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 PRAMEF26H0Y7S4 382 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 GYPAP02724 150 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 SRP14P37108 136 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 PIGPP57054 158 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 SMAGPQ0VAQ4 97 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 OR10P1Q8NGE3 313 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 Q9N2K0 584 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 ONECUT1Q9UBC0 465 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 DNASE2O00115 360 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 ZNF264O43296 627 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 C11orf40Q8WZ69 217 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 CYBAP13498 195 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 SLC22A24Q8N4F4 322 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 TOPAZ1Q8N9V7 1692 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 M0R1B8 84 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 CYR61O00622 381 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 FZD2Q14332 565 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 PGBD5Q8N414 524 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 UBTD2Q8WUN7 234 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 CITED1Q99966 193 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 ANKRD20A5PA0PJZ0 165 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 GCSHP23434 173 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 BCL6P41182 706 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 TIAL1Q01085 375 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 DUSP2Q05923 314 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 LDLRAD2Q5SZI1 272 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 HNRNPA1P09651 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 PPP2CBP62714 309 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 SSBP1Q04837 148 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 HNRNPA1L2Q32P51 320 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 DPH3Q96FX2 82 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 SLC46A1Q96NT5 459 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 HTR1DP28221 377 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 DGAT2L6Q6ZPD8 337 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 OR4D9Q8NGE8 314 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 MARVELD3Q96A59 401 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 UTS2O95399 124 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 DMRTC1Q5HYR2 192 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 MOB3BQ86TA1 216 aa9.97□□□□□ -0.81
CDC42BPA-205ENST00000366769 NHSQ6T4R5 1651 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 FAM221AA4D161 298 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 HSBP1O75506 76 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 SCRG1O75711 98 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 P2RY6Q15077 328 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 ZNF77Q15935 545 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 SLC6A18Q96N87 628 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 CHST6Q9GZX3 395 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 IGHA1P01876 353 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 CPMP14384 443 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 PSMB5P28074 263 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 PLEKHA2Q9HB19 425 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 KLF9Q13886 244 aaPredicted RBP9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 ZNF660Q6AZW8 331 aaPredicted RBP9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 SLC25A4P12235 298 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 CD96P40200 585 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 PET117Q6UWS5 81 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 RNF113BQ8IZP6 322 aaKnown RBP9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 ACY3Q96HD9 319 aa9.96□□□□□ -0.81
CDC42BPA-205ENST00000366769 C1orf105O95561 183 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 RBP4P02753 201 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 CSN3P07498 182 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 SFTPCP11686 197 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 TAAR2Q9P1P5 351 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 ING1Q9UK53 422 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 H0YGG7 62 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 BPIFB3P59826 476 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 PRSS35Q8N3Z0 413 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 HGDQ93099 445 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 LAT2Q9GZY6 243 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 BLACEA4D250 179 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 OR4C46A6NHA9 309 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 DRD1P21728 446 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 KIR2DS3Q14952 304 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 TGIF2LYQ8IUE0 185 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 SLC26A10Q8NG04 563 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 OLIG1Q8TAK6 271 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 VN1R1Q9GZP7 353 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 PATJQ8NI35 1801 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 SH2D1BO14796 132 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 TOX3O15405 576 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 SEMA7AO75326 666 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 HPP00738 406 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 WDR25Q64LD2 544 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 NAT6Q93015 286 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 ADGRL4Q9HBW9 690 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 HCFC1R1Q9NWW0 138 aa9.96□□□□□ -0.82
CDC42BPA-205ENST00000366769 SIRPB1O00241 398 aa9.95□□□□□ -0.82
CDC42BPA-205ENST00000366769 OR5AL1P0C617 328 aa9.95□□□□□ -0.82
CDC42BPA-205ENST00000366769 ADRA1AP35348 466 aa9.95□□□□□ -0.82
CDC42BPA-205ENST00000366769 TFPI2P48307 235 aa9.95□□□□□ -0.82
CDC42BPA-205ENST00000366769 SLC39A11Q8N1S5 342 aa9.95□□□□□ -0.82
CDC42BPA-205ENST00000366769 MISP3Q96FF7 219 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms