RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MTCH1Q9NZJ7 389 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 POLDIP2Q9Y2S7 368 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 A0A1W2PRD5 423 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 A0A1W2PRF3 423 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 A0A1W2PRM7 423 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MEIOCA2RUB1 952 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SAC3D1A6NKF1 404 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 F8VVB4 439 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 F8VWA3 439 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 WIPF1O43516 503 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TSPAN9O75954 239 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 KIR3DL2P43630 455 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CEBPDP49716 269 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CDC42P60953 191 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MIDNQ504T8 468 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TREML4Q6UXN2 200 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 Q6ZSV7 163 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MKXQ8IYA7 352 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 BEND2Q8NDZ0 799 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR10H4Q8NGA5 316 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 C17orf50Q8WW18 174 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RFKQ969G6 155 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 C10orf35Q96D05 121 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FAM234AQ9H0X4 552 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
TNFRSF1A-202ENST00000366159 K7N7A8 449 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SLC1A7O00341 560 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SYT7O43581 403 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ENTPD6O75354 484 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ZNF737O75373 536 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CIB2O75838 187 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 NXPH2O95156 264 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TK1P04183 234 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FUT6P51993 359 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 DLX6P56179 175 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SNRPGP62308 76 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RPL31P62899 125 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 BLMHQ13867 455 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ODF4Q2M2E3 257 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FDX2Q6P4F2 183 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CRIP3Q6Q6R5 217 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CHST5Q9GZS9 411 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SEBOXQ9HB31 216 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SF3B6Q9Y3B4 125 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RNF114Q9Y508 228 aa11.13□□□□□ -0.63
TNFRSF1A-202ENST00000366159 IGKV1-9A0A0C4DH69 117 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MEGF11A6BM72 1044 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 H0YAE9 185 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 EI24O14681 340 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ISG15P05161 165 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 GABRB1P18505 474 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ALDH3A2P51648 485 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ERVFRD-1P60508 538 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ZNF273Q14593 569 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TP53I3Q53FA7 332 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 C17orf107Q6ZR85 190 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 KCTD20Q7Z5Y7 419 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RDH10Q8IZV5 341 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 BATF2Q8N1L9 274 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 DNAAF1Q8NEP3 725 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR4M1Q8NGD0 313 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR2G2Q8NGZ5 317 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR5R1Q8NH85 324 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TRMT10AQ8TBZ6 339 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FRRS1LQ9P0K9 344 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SLC7A11Q9UPY5 501 aa11.12□□□□□ -0.63
TNFRSF1A-202ENST00000366159 LOC107986453A0A1B0GWG9 222 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FAM90A8PA6NJQ4 464 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 H3BSH0 61 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 UBCP0CG48 685 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CCL3L1P16619 93 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ATP6V1E1P36543 226 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TGFBR2P37173 567 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CAPZA1P52907 286 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 NANOS3P60323 173 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 COL10A1Q03692 680 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 KPNB1Q14974 876 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 AANATQ16613 207 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MEDAGQ5VYS4 303 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ZFP1Q6P2D0 407 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 PIFOQ8TCI5 191 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 PP6455Q8WZ26 134 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ADAT3Q96EY9 351 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CEP19Q96LK0 163 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 PLEKHA1Q9HB21 404 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 GNG8Q9UK08 70 aa11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 EXOGQ9Y2C4 368 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-202ENST00000366159 A0A1W2PPH5 198 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 KCNAB3O43448 404 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ANGPTL7O43827 346 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 PAHP00439 452 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CHRM2P08172 466 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CCR9P51686 369 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms