RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 A0A1W2PRQ8 180 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 C5orf63A6NC05 138 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 GAGE10A6NGK3 116 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 GGT3PA6NGU5 568 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 A6NLC8 198 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 CD300LBA8K4G0 201 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 LGALS8O00214 317 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 DVL1O14640 695 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 HSPA12AO43301 675 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR10H3O60404 316 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 FCN3O75636 299 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 FSTL3O95633 263 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 TXNDC12O95881 172 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 RENP00797 406 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 HIST1H1CP16403 213 aaKnown RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 GGT2P36268 569 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 MDH1P40925 334 aaKnown RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 RPS27P42677 84 aaKnown RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 GSK3BP49841 420 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 NPY4RP50391 375 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 DLX1P56177 255 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 BPIFB3P59826 476 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 ELF3P78545 371 aaPredicted RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 ZNF92Q03936 586 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 TRAP1Q12931 704 aaKnown RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 DGCR6Q14129 220 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 KCNJ8Q15842 424 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 TAF9Q16594 264 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 SNAI3Q3KNW1 292 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 KRTAP27-1Q3LI81 207 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 FAM76BQ5HYJ3 339 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 METTL11BQ5VVY1 283 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 SMARCD3Q6STE5 483 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 DPY19L2P2Q6ZN68 376 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 BTN2A1Q7KYR7 527 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 ARPINQ7Z6K5 226 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 TMEM86BQ8N661 226 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 FAM86B1Q8N7N1 296 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 SDR9C7Q8NEX9 313 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR2AJ1Q8NGZ0 328 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR4K13Q8NH42 304 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR2AE1Q8NHA4 323 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 FANK1Q8TC84 345 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 SSMEM1Q8WWF3 244 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 ST8SIA4Q92187 359 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 DYRK2Q92630 601 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 TRIM15Q9C019 465 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 NSRP1Q9H0G5 558 aaKnown RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 SIRPDQ9H106 197 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 SEMA6AQ9H2E6 1030 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR52D1Q9H346 318 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 ANKRD19PQ9H560 264 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 FN3KRPQ9HA64 309 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 RPRD1BQ9NQG5 326 aaKnown RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 SNTG1Q9NSN8 517 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 MRGBPQ9NV56 204 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 C1orf123Q9NWV4 160 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 ADA2Q9NZK5 511 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 FAM32AQ9Y421 112 aaKnown RBP4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 N6AMT1Q9Y5N5 214 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 POMT1Q9Y6A1 747 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 V9GYQ6 96 aa4.23□□□□□ -1.73
RNU4-4P-201ENST00000364588 TET2Q6N021 2002 aaPredicted RBP4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 TRAV38-1A0A0B4J264 116 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 A0A1B0GW55 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 OOEPA6NGQ2 149 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 TVP23AA6NH52 213 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 M0R135 149 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 GMDSO60547 372 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 CLPXO76031 633 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 LIPFP07098 398 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4L2P0CJ85 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4L3P0CJ86 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4L4P0CJ87 422 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4L5P0CJ88 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4L6P0CJ89 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4L7P0CJ90 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 SLC2A1P11166 492 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 PSKH1P11801 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 COX4I1P13073 169 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 SLC6A6P31641 620 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 PYCR1P32322 319 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 IER3P46695 156 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 NUDT2P50583 147 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 PRKXP51817 358 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 EFNB1P98172 346 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 SPIBQ01892 262 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 ECH1Q13011 328 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 RFX4Q33E94 735 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 SLC36A3Q495N2 470 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 GLYATL3Q5SZD4 288 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 HIST2H2BDQ6DRA6 164 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4L9Q6RFH8 374 aaPredicted RBP4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 VMO1Q7Z5L0 202 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 GCSAMQ8N6F7 178 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 CYB561A3Q8NBI2 242 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 OR56B2PQ8NGI1 322 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 SEH1LQ96EE3 360 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms