RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 SCML1Q9UN30 329 aa2.88□□□□□ -1.95
RPL39-201ENST00000361575 KLF13Q9Y2Y9 288 aaPredicted RBP2.88□□□□□ -1.95
RPL39-201ENST00000361575 SNX24Q9Y343 169 aa2.88□□□□□ -1.95
RPL39-201ENST00000361575 CBY1Q9Y3M2 126 aa2.88□□□□□ -1.95
RPL39-201ENST00000361575 IGHV1-3A0A0C4DH29 117 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 A0A1B0GXF2 115 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 COLCA2A8K830 154 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 RCBTB2O95199 551 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 CYB5R3P00387 301 aaPredicted RBP2.87□□□□□ -1.95
RPL39-201ENST00000361575 IGKV5-2P06315 115 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 GIMD1P0DJR0 217 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 CD28P10747 220 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 ZNF32P17041 273 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 AZU1P20160 251 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 M6PRP20645 277 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 SYT1P21579 422 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 NPY1RP25929 384 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 PSMB2P49721 201 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 RAB38P57729 211 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 DSTNP60981 165 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 TSPAN5P62079 268 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 ADIGQ0VDE8 80 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 IDNKQ5T6J7 187 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 CLEC6AQ6EIG7 209 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 SHISA6Q6ZSJ9 500 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 OSR2Q8N2R0 312 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 SLC35G3Q8N808 338 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 OR5M1Q8NGP8 315 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 ZNF420Q8TAQ5 688 aaPredicted RBP2.87□□□□□ -1.95
RPL39-201ENST00000361575 UBA3Q8TBC4 463 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 GTF2H4Q92759 462 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 STARD4Q96DR4 205 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 SMIM8Q96KF7 97 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 CATSPER2Q96P56 530 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 QKIQ96PU8 341 aaKnown RBP eCLIP2.87□□□□□ -1.95
RPL39-201ENST00000361575 DOK1Q99704 481 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 MARVELD1Q9BSK0 173 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 NXF2Q9GZY0 626 aaKnown RBP2.87□□□□□ -1.95
RPL39-201ENST00000361575 NLE1Q9NVX2 485 aaPredicted RBP2.87□□□□□ -1.95
RPL39-201ENST00000361575 RBM12B-AS1Q9P1G2 102 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 ENOPH1Q9UHY7 261 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 SLIT3O75094 1523 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 TRIP11Q15643 1979 aa2.87□□□□□ -1.95
RPL39-201ENST00000361575 YEATS2Q9ULM3 1422 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 LRCOL1A6NCL2 159 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 RBFOX3A6NFN3 312 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 OR2AT4A6NND4 320 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 MKRN2OSH3BPM6 223 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 FFAR1O14842 300 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 SCN2BO60939 215 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 RLN2P04090 185 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 IL1RNP18510 177 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 TAC1P20366 129 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 RPL10AP62906 217 aaKnown RBP2.86□□□□□ -1.95
RPL39-201ENST00000361575 PITPNAQ00169 270 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 CD164Q04900 197 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 ZNF616Q08AN1 781 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 PMS2P3Q13401 168 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 ANGPT1Q15389 498 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 BSXQ3C1V8 233 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 ZNF880Q6PDB4 577 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 MORN3Q6PF18 240 aaPredicted RBP2.86□□□□□ -1.95
RPL39-201ENST00000361575 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 STK40Q8N2I9 435 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 OR8G5Q8NG78 346 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 OR2Z1Q8NG97 314 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 CCL17Q92583 94 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 ZMYND19Q96E35 227 aaPredicted RBP2.86□□□□□ -1.95
RPL39-201ENST00000361575 OR10C1Q96KK4 312 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 MS4A8Q9BY19 250 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 WDR55Q9H6Y2 383 aaPredicted RBP2.86□□□□□ -1.95
RPL39-201ENST00000361575 LINC00574Q9H8X3 128 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 CD300AQ9UGN4 299 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 ELP1O95163 1332 aa2.86□□□□□ -1.95
RPL39-201ENST00000361575 NPHP4O75161 1426 aaPredicted RBP2.85□□□□□ -1.95
RPL39-201ENST00000361575 A0A1B0GX12 115 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 ISPDA4D126 451 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 TRPC5OSA6NMA1 111 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 ZNF850A8MQ14 1090 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 CENPBD1B2RD01 187 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 SMLR1H3BR10 107 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 LGALS9O00182 355 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 BET1O15155 118 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 WISP3O95389 354 aaPredicted RBP2.85□□□□□ -1.95
RPL39-201ENST00000361575 HLA-GP17693 338 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 NTF3P20783 257 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 GTF2H1P32780 548 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 UGT2B10P36537 528 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 TUFMP49411 452 aaKnown RBP2.85□□□□□ -1.95
RPL39-201ENST00000361575 OR4D1Q15615 310 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 TRAM1Q15629 374 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 ZNF404Q494X3 552 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 OR10J3Q5JRS4 329 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 CLLU1OSQ5K130 101 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 KCTD16Q68DU8 428 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 PDPK2PQ6A1A2 396 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 HBMQ6B0K9 141 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 UNQ9165/PRO28630Q6UXU0 137 aa2.85□□□□□ -1.95
RPL39-201ENST00000361575 COMTD1Q86VU5 262 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms