RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 RNASEKQ6P5S7 137 aaKnown RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 MSRB3Q8IXL7 192 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 CMBLQ96DG6 245 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 DERL3Q96Q80 235 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PTDSS2Q9BVG9 487 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 LHX9Q9NQ69 397 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 CLEC2DQ9UHP7 191 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 CHST2Q9Y4C5 530 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 SHANK3Q9BYB0 1731 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 LYZL6O75951 148 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ZP3P21754 424 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 LPAR6P43657 344 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PMP22Q01453 160 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PABPC1L2AQ5JQF8 200 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 BLNKQ8WV28 456 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 NKX6-2Q9C056 277 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 MS4A7Q9GZW8 240 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 IGHV1OR21-1A0A087WYE8 117 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 CCL21O00585 134 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 DNPH1O43598 174 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 KRASP01116 189 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 HOXC4P09017 264 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 HIST1H1EP10412 219 aaKnown RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 FPR2P25090 351 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 NPY1RP25929 384 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 DGCR2P98153 550 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PJVKQ0ZLH3 352 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 HSD17B13Q7Z5P4 300 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 FAM26EQ8N5C1 309 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 SCN8AQ9UQD0 1980 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 C7orf66A4D0T2 115 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 OR5B21A6NL26 309 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 IFITM5A6NNB3 132 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF207O43670 478 aaKnown RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ITGBL1O95965 494 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ACTL6AO96019 429 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ZFP36L2P47974 494 aaKnown RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 DHRS7BQ6IAN0 325 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ARL6IP6Q8N6S5 226 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 KLHDC1Q8N7A1 406 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 OR10Z1Q8NGY1 313 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 C4orf45Q96LM5 186 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PIMREGQ9BSJ6 248 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 SLC7A10Q9NS82 523 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 COL4A1P02462 1669 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ACP1P24666 158 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 CDK5R1Q15078 307 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 OR5AP2Q8NGF4 316 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 OR1B1Q8NGR6 318 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PLSCR3Q9NRY6 295 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 V9GYH0 126 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 FAM157AC9JC47 383 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 UQCRFS1P47985 274 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 RRN3P1Q2M238 152 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF774Q6NX45 483 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 RPUSD3Q6P087 351 aaKnown RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PAQR6Q6TCH4 344 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 CLEC2AQ6UVW9 174 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 TP53I13Q8NBR0 393 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 OTOSQ8NHW6 89 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 GPR119Q8TDV5 335 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PAPPA2Q9BXP8 1791 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 HTR1DP28221 377 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 SLC38A11Q08AI6 406 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 RNF151Q2KHN1 245 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 FFAR4Q5NUL3 377 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 PTPMT1Q8WUK0 201 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-202ENST00000356435 QSER1Q2KHR3 1735 aa4.94□□□□□ -1.62
PTPRD-202ENST00000356435 A0A0B4J2E0 115 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 A0A1B0GX12 115 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 A0A1W2PPQ1 181 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 FAM24AA6NFZ4 105 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 RFPL4AA6NLU0 287 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 RFPL4AL1F8VTS6 287 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 KIR3DL2P43630 455 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 HMGA2P52926 109 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 MLF1P58340 268 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 MRPL58Q14197 206 aaKnown RBP4.93□□□□□ -1.62
PTPRD-202ENST00000356435 WDR73Q6P4I2 378 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 RAB40CQ96S21 281 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 CABLES2Q9BTV7 478 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 SLC17A5Q9NRA2 495 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 LRP12Q9Y561 859 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 GPX5O75715 221 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 CPN1P15169 458 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 USF1P22415 310 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-202ENST00000356435 PCBP3P57721 371 aaKnown RBP4.93□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF141Q15928 474 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 ECSCRQ19T08 205 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 WDR74Q6RFH5 385 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-202ENST00000356435 TEX261Q6UWH6 196 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF793Q6ZN11 406 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 LRRTM1Q86UE6 522 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 PDPNQ86YL7 162 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 TGIF2Q9GZN2 237 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 WBP1LQ9NX94 342 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 RABAC1Q9UI14 185 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 SLC22A13Q9Y226 551 aa4.93□□□□□ -1.62
PTPRD-202ENST00000356435 U3KQ87 197 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms