RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
UPF2-201ENST00000356352 DNAJB12Q9NXW2 375 aaKnown RBP5.77□□□□□ -1.49
UPF2-201ENST00000356352 TCFL5Q9UL49 500 aa5.77□□□□□ -1.49
UPF2-201ENST00000356352 TOGARAM1Q9Y4F4 1720 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 MYH15Q9Y2K3 1946 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 F2RL2O00254 374 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 GYPAP02724 150 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 GALNSP34059 522 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 IL24Q13007 206 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 SLC25A35Q3KQZ1 300 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 MIDNQ504T8 468 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 CLLU1Q5K131 121 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 SLC25A30Q5SVS4 291 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 TMEM215Q68D42 235 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 FAHD2BQ6P2I3 314 aaPredicted RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 MAMSTRQ6ZN01 415 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 PDPNQ86YL7 162 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 OR4D10Q8NGI6 311 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 SLC25A40Q8TBP6 338 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ZNF596Q8TC21 504 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 FAHD2AQ96GK7 314 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 HSD17B10Q99714 261 aaKnown RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 RASL11BQ9BPW5 248 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 OCEL1Q9H607 264 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 IL21Q9HBE4 155 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 TECRQ9NZ01 308 aaKnown RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 ERRFI1Q9UJM3 462 aaPredicted RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 SIGLEC7Q9Y286 467 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 MYH10P35580 1976 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ZNF207O43670 478 aaKnown RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 NEURL1O76050 574 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 BCL3P20749 454 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 RPS4Y1P22090 263 aaKnown RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 ACP1P24666 158 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 OR3A4PP47883 348 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ID4P47928 161 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 GZMKP49863 264 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 CEBPEQ15744 281 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 PABPC1L2AQ5JQF8 200 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 WDR38Q5JTN6 314 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ETV3LQ6ZN32 361 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 OR10D3Q8NH80 312 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 OR1L3Q8NH93 324 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ANAPC16Q96DE5 110 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 WDR34Q96EX3 536 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 WDFY2Q96P53 400 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 GABRG3Q99928 467 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 SLC7A10Q9NS82 523 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 NRAPQ86VF7 1730 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 A0A1W2PQD3 144 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 PYCARD-AS1I3L0S3 204 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 MBTPS2O43462 519 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ZNF737O75373 536 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 CST7O76096 145 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 EPHA8P29322 1005 aaPredicted RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 SULT1A2P50226 295 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 PNRC1Q12796 327 aaPredicted RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 ZNF141Q15928 474 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ANKRD55Q3KP44 614 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 CD300LDQ6UXZ3 194 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 WDR31Q8NA23 367 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 RELL2Q8NC24 303 aaPredicted RBP5.76□□□□□ -1.49
UPF2-201ENST00000356352 OR10C1Q96KK4 312 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 DUXBA0A1W2PPF3 345 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 LINC01565O15544 149 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 INHBBP09529 407 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 CD96P40200 585 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ETFDHQ16134 617 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 TUSC1Q2TAM9 212 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 PRICKLE4Q2TBC4 344 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 TEX261Q6UWH6 196 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 CLEC9AQ6UXN8 241 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 CCDC190Q86UF4 302 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 C1orf174Q8IYL3 243 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 OR6X1Q8NH79 312 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 ARHGAP5-AS1Q96IT6 56 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 TSPAN32Q96QS1 320 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 PLA2G3Q9NZ20 509 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 U3KQ87 197 aa5.76□□□□□ -1.49
UPF2-201ENST00000356352 MYH4Q9Y623 1939 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 M0R143 59 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ONECUT2O95948 504 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ZNF32P17041 273 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 ID1P41134 155 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 RPS27P42677 84 aaKnown RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 LYZP61626 148 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 LSM11P83369 360 aaKnown RBP eCLIP5.75□□□□□ -1.49
UPF2-201ENST00000356352 IZUMO4Q1ZYL8 232 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 FDX2Q6P4F2 183 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 GUSBP11Q6P575 273 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 LIAT1Q6ZQX7 453 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 CXorf67Q86X51 503 aaPredicted RBP5.75□□□□□ -1.49
UPF2-201ENST00000356352 OR52B4Q8NGK2 314 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 NUBPLQ8TB37 319 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 CCL17Q92583 94 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 PTP4A1Q93096 173 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 DERL3Q96Q80 235 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 DIRC2Q96SL1 478 aa5.75□□□□□ -1.49
UPF2-201ENST00000356352 HEXA-AS1Q9H8Q6 139 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms