RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ERVS71-1P61550 626 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 PCK2Q16822 640 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 PHYHD1Q5SRE7 291 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 EMG1Q92979 244 aaKnown RBP12.5□□□□□ -0.41
SREBF1-202ENST00000355815 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
SREBF1-202ENST00000355815 OR8B4Q96RC9 309 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 PISDQ9UG56 409 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 FRG2CA6NGY1 282 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 RER1O15258 196 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 WDR1O75083 606 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 GLB1P16278 677 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 CD200R1LQ6Q8B3 271 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 OR52N5Q8NH56 324 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 PRUNE2Q8WUY3 3088 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 OGG1O15527 345 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 CRHP06850 196 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF90Q03938 601 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 FHL5Q5TD97 284 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 OR51F2Q8NH61 342 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 NRIP2Q9BQI9 281 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 UCK1Q9HA47 277 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 LPAR3Q9UBY5 353 aa12.5□□□□□ -0.41
SREBF1-202ENST00000355815 BLACEA4D250 179 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 PTBP3O95758 552 aaKnown RBP12.49□□□□□ -0.41
SREBF1-202ENST00000355815 SLC35A1P78382 337 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 SARGQ9BW04 601 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 ZDHHC11Q9H8X9 412 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 HEATR5AQ86XA9 2040 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 PI4KAP42356 2102 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 PLSCR5A0PG75 271 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 MEX3AA1L020 520 aaKnown RBP12.49□□□□□ -0.41
SREBF1-202ENST00000355815 FAM24AA6NFZ4 105 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 FUT7Q11130 342 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 NHLRC3Q5JS37 347 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
SREBF1-202ENST00000355815 SMRP1Q8NCR6 262 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 ARHGAP5-AS1Q96IT6 56 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 GPR61Q9BZJ8 451 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 PLEKHA2Q9HB19 425 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 RCL1Q9Y2P8 373 aaKnown RBP12.49□□□□□ -0.41
SREBF1-202ENST00000355815 MT-ATP6P00846 226 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 KITLGP21583 273 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 CHRNA7P36544 502 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 CCL7P80098 99 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 IL22RA1Q8N6P7 574 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 SEC11CQ9BY50 192 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 OR51I2Q9H344 312 aa12.49□□□□□ -0.41
SREBF1-202ENST00000355815 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
SREBF1-202ENST00000355815 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 IL2RGP31785 369 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 PTTG1IPP53801 180 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 PNLIPRP2P54317 469 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 CASP6P55212 293 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 RPP30P78346 268 aaKnown RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 OR5I1Q13606 314 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 C9orf40Q8IXQ3 194 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 PHYHIPLQ96FC7 376 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 NECAP2Q9NVZ3 263 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 PATE4P0C8F1 98 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 PMCHP20382 165 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 SNCAP37840 140 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 RPS15P62841 145 aaKnown RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 SLC38A9Q8NBW4 561 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 OR4C5Q8NGB2 326 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 MS4A10Q96PG2 267 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 A6NCN8 305 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 OR4C45A6NMZ5 311 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 H3BMH7 237 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 HOXC4P09017 264 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 CST2P09228 141 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 HNRNPA3P51991 378 aaKnown RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 MYBPHQ13203 477 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 VASH2Q86V25 355 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 ROBO4Q8WZ75 1007 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 CLDN34H7C241 214 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 TTRP02766 147 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 RSPO4Q2I0M5 234 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 ADAD2Q8NCV1 583 aaKnown RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 RDH5Q92781 318 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 CTHRC1Q96CG8 243 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 ZCCHC4Q9H5U6 513 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 AURKAIP1Q9NWT8 199 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
SREBF1-202ENST00000355815 STRAPQ9Y3F4 350 aaKnown RBP12.48□□□□□ -0.41
SREBF1-202ENST00000355815 KLF4O43474 513 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 LMX1BO60663 402 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 DUSP3P51452 185 aaPredicted RBP12.47□□□□□ -0.41
SREBF1-202ENST00000355815 GAS1P54826 345 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 ECH1Q13011 328 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 LINC00696Q6ZRV3 163 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 BDP1A6H8Y1 2624 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 LILRA5A6NI73 299 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 MMP9P14780 707 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms