RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
SCN8A-202ENST00000355133 PRRX2Q99811 253 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CXXC4Q9H2H0 198 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CNTD2Q9H8S5 307 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF275Q9NSD4 429 aaPredicted RBP11.73□□□□□ -0.53
SCN8A-202ENST00000355133 IL36GQ9NZH8 169 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 C3orf85A0A1B0GTC6 90 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 OR3A1P47881 315 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 TAGLNQ01995 201 aaKnown RBP11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CCDC190Q86UF4 302 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 RASL10BQ96S79 203 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 RAB1BQ9H0U4 201 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CDC42EP2O14613 210 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 TMEM127O75204 238 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 AGFG2O95081 481 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CD3EP07766 207 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CRYBB2P43320 205 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 TUSC5Q8IXB3 177 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 BLNKQ8WV28 456 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 SIRT3Q9NTG7 399 aaPredicted RBP11.73□□□□□ -0.53
SCN8A-202ENST00000355133 MDH2P40926 338 aaKnown RBP11.73□□□□□ -0.53
SCN8A-202ENST00000355133 PRRX1P54821 245 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 OR4F17Q8NGA8 305 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 OR5D13Q8NGL4 314 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 OR2Y1Q8NGV0 311 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 ASB10Q8WXI3 467 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 OR5V1Q9UGF6 321 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 hADV38S2A0JD32 116 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 PATE3B3GLJ2 98 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CTAG2O75638 210 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 BMI1P35226 326 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 RAB7AP51149 207 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CARFQ8N187 725 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 C17orf47Q8NEP4 570 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 HSD17B10Q99714 261 aaKnown RBP11.73□□□□□ -0.53
SCN8A-202ENST00000355133 KCNK15Q9H427 330 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 RHOFQ9HBH0 211 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 SLC17A5Q9NRA2 495 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.73□□□□□ -0.53
SCN8A-202ENST00000355133 NUP205Q92621 2012 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 KNL1Q8NG31 2342 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF205O95201 554 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
SCN8A-202ENST00000355133 SPNS3Q6ZMD2 512 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 DOK5Q9P104 306 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 SPAARA0A1B0GVQ0 90 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 OR2M5A3KFT3 312 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 C1QL3Q5VWW1 255 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 DHRS7BQ6IAN0 325 aaPredicted RBP11.72□□□□□ -0.53
SCN8A-202ENST00000355133 GPR87Q9BY21 358 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF768Q9H5H4 540 aaKnown RBP11.72□□□□□ -0.53
SCN8A-202ENST00000355133 FGF2P09038 288 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 ACSM4P0C7M7 580 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 KCNJ3P48549 501 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 PPP1R1AQ13522 171 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 CD226Q15762 336 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 ZDHHC22Q8N966 263 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 ZBTB44Q8NCP5 570 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 RAB18Q9NP72 206 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 DOCK2Q92608 1830 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 PDCD6O75340 191 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 NDUFB6O95139 128 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 KRTDAPP60985 99 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 OR1L4Q8NGR5 311 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 CXorf58Q96LI9 332 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 CACNG5Q9UF02 275 aa11.72□□□□□ -0.53
SCN8A-202ENST00000355133 OR8B12Q8NGG6 310 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 ZMIZ1Q9ULJ6 1067 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-202ENST00000355133 CDX4O14627 284 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-202ENST00000355133 TOX3O15405 576 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-202ENST00000355133 SCO1O75880 301 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 SFT2D2O95562 160 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 PAX5Q02548 391 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 FNDC7Q5VTL7 733 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 TRAT1Q6PIZ9 186 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 DEGS2Q6QHC5 323 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 MED30Q96HR3 178 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 OR1A1Q9P1Q5 309 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 NAGKQ9UJ70 344 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 LRP5O75197 1615 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 DNASE2O00115 360 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-202ENST00000355133 CD160O95971 181 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 GZMKP49863 264 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 RAC3P60763 192 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 MIDNQ504T8 468 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 NUFIP2Q7Z417 695 aaKnown RBP11.71□□□□□ -0.53
SCN8A-202ENST00000355133 C10orf90Q96M02 699 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 RASL12Q9NYN1 266 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 TMED3Q9Y3Q3 217 aa11.71□□□□□ -0.53
SCN8A-202ENST00000355133 LOC102723971A0A1B0GUV8 181 aa11.71□□□□□ -0.54
SCN8A-202ENST00000355133 HRKO00198 91 aa11.71□□□□□ -0.54
SCN8A-202ENST00000355133 TMPRSS2O15393 492 aa11.71□□□□□ -0.54
SCN8A-202ENST00000355133 WDR74Q6RFH5 385 aaPredicted RBP11.71□□□□□ -0.54
SCN8A-202ENST00000355133 OR6X1Q8NH79 312 aa11.71□□□□□ -0.54
SCN8A-202ENST00000355133 APOBEC4Q8WW27 367 aaKnown RBP11.71□□□□□ -0.54
SCN8A-202ENST00000355133 TMPRSS5Q9H3S3 457 aa11.71□□□□□ -0.54
SCN8A-202ENST00000355133 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms