RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 OR51F2Q8NH61 342 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 FRZBQ92765 325 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 SERINC1Q9NRX5 453 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 RPH3ALQ9UNE2 315 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 MED13Q9UHV7 2174 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 IRGMA1A4Y4 181 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 MCIDASD6RGH6 385 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 M0R143 59 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 PIN1P1O15428 100 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 KLK10O43240 276 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 XRCC3O43542 346 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 GLSO94925 669 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-203ENST00000354674 CYB5R3P00387 301 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-203ENST00000354674 RFPL3SP0C7P2 107 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 GZMBP10144 247 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 MIDNQ504T8 468 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 SULF2Q8IWU5 870 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 ZSCAN4Q8NAM6 433 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-203ENST00000354674 HIST1H2BLQ99880 126 aa8.86□□□□□ -0.99
SYNE1-203ENST00000354674 BOKQ9UMX3 212 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-203ENST00000354674 LIPT2A6NK58 231 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 ADAP1O75689 374 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 AHSA1O95433 338 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 IL18BPO95998 194 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 RAB4AP20338 218 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 FAUP35544 74 aaKnown RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 IL13RA1P78552 427 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 ZP4Q12836 540 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 PPP1R1AQ13522 171 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 UBE2V2Q15819 145 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 DEFB109BQ30KR1 87 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 RNASE10Q5GAN6 216 aaKnown RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 STEAP1BQ6NZ63 245 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 OR5M8Q8NGP6 311 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 Q8WTZ3 238 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 MFRPQ9BY79 579 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 SYT4Q9H2B2 425 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 MRPS18AQ9NVS2 196 aaKnown RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 OR5AC2Q9NZP5 309 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 DKKL1Q9UK85 242 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 CFAP47Q6ZTR5 3102 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 PLPP3O14495 311 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 TNFSF10P50591 281 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 CCL11P51671 97 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 TDGF1P3P51864 188 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 RPL18Q07020 188 aaKnown RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 SLC22A6Q4U2R8 563 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 PHYHIPLQ96FC7 376 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 RARRES2Q99969 163 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 HES7Q9BYE0 225 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 NELFAQ9H3P2 528 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 KLF13Q9Y2Y9 288 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 TIMM10BQ9Y5J6 103 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 NCKAP5O14513 1909 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 IGHMP01871 453 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 IGHA1P01876 353 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 PRH1P02810 166 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 HPNP05981 417 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 RPS27P42677 84 aaKnown RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 ERVFRD-1P60508 538 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 MYBPHQ13203 477 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 HEPN1Q6WQI6 88 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 C10orf53Q8N6V4 93 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 ADPRHL1Q8NDY3 354 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 C22orf15Q8WYQ4 148 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 EXTL1Q92935 676 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 ZNF703Q9H7S9 590 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 DNAJC4Q9NNZ3 241 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 HDGFL3Q9Y3E1 203 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 PTPRZ1P23471 2315 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-203ENST00000354674 MPDZO75970 2070 aa8.85□□□□□ -0.99
SYNE1-203ENST00000354674 PLPP2O43688 288 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 SMPD2O60906 423 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 CD14P08571 375 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 TAGLN2P37802 199 aaKnown RBP8.84□□□□□ -0.99
SYNE1-203ENST00000354674 RAC1P63000 192 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ZNF85Q03923 595 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 TLE1Q04724 770 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 SLC9A3R2Q15599 337 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 GXYLT1Q4G148 440 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ALG10Q5BKT4 473 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 C1orf185Q5T7R7 199 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ASB17Q8WXJ9 295 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 CST11Q9H112 138 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 KCNJ16Q9NPI9 418 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ALKBH4Q9NXW9 302 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 GRHPRQ9UBQ7 328 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 IER3IP1Q9Y5U9 82 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 CELSR3Q9NYQ7 3312 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 FRYQ5TBA9 3013 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 MS4A18H0YCH9 400 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 H0YIZ8 118 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 TNFSF12O43508 249 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ARL6IP5O75915 188 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 PMS2P2O95744 297 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 GPANK1O95872 356 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 SCGB1D1O95968 90 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 IRF2P14316 349 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 CD46P15529 392 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms