RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SPEM2Q0P670 501 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 MST1LQ2TV78 715 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 GGNBP1Q5YKI7 109 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 PMS2CLQ68D20 193 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 SMOC1Q9H4F8 434 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 TMEM100Q9NV29 134 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 K7EPK0 472 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 DIRAS3O95661 229 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 HKR1P10072 659 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 RPL12P30050 165 aaKnown RBP17.02■□□□□ 0.32
COL13A1-201ENST00000354547 LPAR6P43657 344 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 LPAL2Q16609 132 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 AAED1Q7RTV5 226 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 GPR137CQ8N3F9 429 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 FAM71E2Q8N5Q1 922 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 OR1F12Q8NHA8 337 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 PIGCQ92535 297 aa17.02■□□□□ 0.32
COL13A1-201ENST00000354547 FREM1Q5H8C1 2179 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 RFC3P40938 356 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 FOLR3P41439 243 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 HIST1H3AP68431 136 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 MRPS34P82930 218 aaKnown RBP17.02■□□□□ 0.31
COL13A1-201ENST00000354547 ABCA11PQ4W5N1 156 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 HIST2H3PS2Q5TEC6 136 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 HIST2H3AQ71DI3 136 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 FBXL14Q8N1E6 418 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 OR2Y1Q8NGV0 311 aa17.02■□□□□ 0.31
COL13A1-201ENST00000354547 MARS2Q96GW9 593 aaKnown RBP17.02■□□□□ 0.31
COL13A1-201ENST00000354547 DOCK7Q96N67 2140 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 PCP4L1A6NKN8 68 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 P04436 131 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 SPINK2P20155 84 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 CCNOP22674 350 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 NPBWR1P48145 328 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 SUCLG1P53597 346 aaKnown RBP17.01■□□□□ 0.31
COL13A1-201ENST00000354547 CEACAM16Q2WEN9 425 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 OR5L1Q8NGL2 311 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 CNTNAP3Q9BZ76 1288 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 RHOFQ9HBH0 211 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL13A1-201ENST00000354547 KNTC1P50748 2209 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 XRCC2O43543 280 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 SYNGR3O43761 229 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 IFNA21P01568 189 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 APOC1P02654 83 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 NFYBP25208 207 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 FCGR2CP31995 323 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 RBP2P50120 134 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 MLF1P58340 268 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 UQCC1Q9NVA1 299 aa17.01■□□□□ 0.31
COL13A1-201ENST00000354547 PURGQ9UJV8 347 aaKnown RBP17.01■□□□□ 0.31
COL13A1-201ENST00000354547 NRASP01111 189 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 MUC1P15941 1255 aaPredicted RBP17■□□□□ 0.31
COL13A1-201ENST00000354547 NOVA1P51513 510 aaKnown RBP17■□□□□ 0.31
COL13A1-201ENST00000354547 SMCO1Q147U7 214 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 SLC22A25Q6T423 547 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 C5orf24Q7Z6I8 188 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 MMP26Q9NRE1 261 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 FBXL17Q9UF56 701 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 IGKV1-12A0A0C4DH73 117 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 IGKV1D-12P01611 117 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 OR5AC1P0C628 307 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 PSG4Q00888 419 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 IL15RAQ13261 267 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 RAB35Q15286 201 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 PABPC1L2AQ5JQF8 200 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 M1APQ8TC57 530 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 RHBDD1Q8TEB9 315 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF845Q96IR2 970 aaPredicted RBP17■□□□□ 0.31
COL13A1-201ENST00000354547 NCOR1O75376 2440 aa17■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF728P0DKX0 622 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 CRYGSP22914 178 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF133P52736 654 aaPredicted RBP16.99■□□□□ 0.31
COL13A1-201ENST00000354547 TMEM33P57088 247 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 RAC3P60763 192 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 PJVKQ0ZLH3 352 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 FOXL2NBQ6ZUU3 175 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 OR11L1Q8NGX0 322 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 ADAMTS17Q8TE56 1095 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 ABHD3Q8WU67 409 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 BSCL2Q96G97 398 aaPredicted RBP16.99■□□□□ 0.31
COL13A1-201ENST00000354547 TMEM38BQ9NVV0 291 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 H7C2Y5 167 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 ZNF92Q03936 586 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 SRYQ05066 204 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 LYZL2Q7Z4W2 148 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 OR10AD1Q8NGE0 317 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 OR5T2Q8NGG2 359 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 ST3GAL6Q9Y274 331 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 LYL1P12980 280 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 PVALBP20472 110 aaPredicted RBP16.99■□□□□ 0.31
COL13A1-201ENST00000354547 OR10D3Q8NH80 312 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 PRDM6Q9NQX0 595 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 MLXQ9UH92 298 aa16.99■□□□□ 0.31
COL13A1-201ENST00000354547 NCKAP5O14513 1909 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 MED19A0JLT2 244 aaPredicted RBP16.98■□□□□ 0.31
COL13A1-201ENST00000354547 FCGR3AP08637 254 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 CD80P33681 288 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 ARL6IP1Q15041 203 aa16.98■□□□□ 0.31
COL13A1-201ENST00000354547 PLCXD3Q63HM9 321 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms