RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 NARS2Q96I59 477 aaKnown RBP13.46□□□□□ -0.26
TNFSF13-202ENST00000349228 NKX6-2Q9C056 277 aaPredicted RBP13.46□□□□□ -0.26
TNFSF13-202ENST00000349228 OR2H1Q9GZK4 316 aa13.46□□□□□ -0.26
TNFSF13-202ENST00000349228 GSKIPQ9P0R6 139 aa13.46□□□□□ -0.26
TNFSF13-202ENST00000349228 DNASE2O00115 360 aaPredicted RBP13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 CYTIPO60759 359 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 FARS2O95363 451 aaKnown RBP13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM157CP0CG43 387 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 ACP1P24666 158 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 PSG4Q00888 419 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 IAH1Q2TAA2 248 aaPredicted RBP13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 TRIM61Q5EBN2 209 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 DMRTC1Q5HYR2 192 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 ACER2Q5QJU3 275 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 C6orf15Q6UXA7 325 aaPredicted RBP13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 OSR2Q8N2R0 312 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 OR10D3Q8NH80 312 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 ROBO4Q8WZ75 1007 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 GALNT14Q96FL9 552 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 FAAP24Q9BTP7 215 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 GPR35Q9HC97 309 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 LPAR3Q9UBY5 353 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 AK3Q9UIJ7 227 aa13.45□□□□□ -0.26
TNFSF13-202ENST00000349228 hCG_38984A0A1B0GV85 526 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 LRRC3CA6NJW4 275 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 PRSS44E7EML9 344 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 TOR1AO14656 332 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 GAPDHP04406 335 aaKnown RBP13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 SFTPBP07988 381 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 FCGR3AP08637 254 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 OTX2P32243 289 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 CYB561P49447 251 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 UCP3P55916 312 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 OR8B8Q15620 311 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 TAF9Q16594 264 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 CEACAM16Q2WEN9 425 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 C10orf91Q5T1B1 145 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 TMEM200AQ86VY9 491 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 OR2AE1Q8NHA4 323 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ADAMTS17Q8TE56 1095 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 TMED6Q8WW62 240 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 SUCNR1Q9BXA5 334 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 PLEKHA2Q9HB19 425 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 SDK1Q7Z5N4 2213 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 IGKV1D-8A0A087WSZ0 117 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ZNF816-ZNF321PA0A0X1KG74 233 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 PMS2P1A4D2B8 440 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 MSGN1A6NI15 193 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ZNF850A8MQ14 1090 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 PATE3B3GLJ2 98 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ABCD4O14678 606 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 KCNAB3O43448 404 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 CST4P01036 141 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ZNF728P0DKX0 622 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 NTF4P34130 210 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 S100A10P60903 97 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 PDZK1IP1Q13113 114 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ATRAIDQ6UW56 229 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 LRTM2Q8N967 370 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 SPSB4Q96A44 273 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ZNF775Q96BV0 537 aaPredicted RBP13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 CDX2Q99626 313 aaPredicted RBP13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 SYT3Q9BQG1 590 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 PRDM14Q9GZV8 571 aa13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 ZNF629Q9UEG4 869 aaPredicted RBP13.44□□□□□ -0.26
TNFSF13-202ENST00000349228 IGKV1-27A0A075B6S5 117 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 TRAPPC6AO75865 159 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 TSPAN9O75954 239 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 JTBO76095 146 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 HKR1P10072 659 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 B4GALT1P15291 398 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 TCN2P20062 427 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 PI4KAP42356 2102 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 RGS19P49795 217 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 BLOC1S1P78537 153 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM3AP98173 230 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 HGFACQ04756 655 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 Q0VFX4 171 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 PJVKQ0ZLH3 352 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 MALLQ13021 153 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 TMEM211Q6ICI0 200 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 AKR7LQ8NHP1 331 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 SMIM8Q96KF7 97 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 TSNAXQ99598 290 aaKnown RBP13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 ZNF286AQ9HBT8 521 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 PRR13Q9NZ81 148 aa13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 BOKQ9UMX3 212 aaPredicted RBP13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 CARHSP1Q9Y2V2 147 aaKnown RBP13.43□□□□□ -0.26
TNFSF13-202ENST00000349228 A0A0C4DFX4 3053 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 A0A0G2JMM0 328 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 A0A1W2PPB8 328 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 A0A1W2PRS3 328 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM90A10PA6NDY2 464 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM90A18PA6NE21 464 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM90A16PA6NEW6 464 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM90A20PA6NIJ5 464 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM90A8PA6NJQ4 464 aa13.42□□□□□ -0.26
TNFSF13-202ENST00000349228 FAM90A7PA6NKC0 464 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms