RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SEH1LQ96EE3 360 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 CCL19Q99731 98 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 RAB1BQ9H0U4 201 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 MIXL1Q9H2W2 232 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 BANF2Q9H503 90 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 FN3KRPQ9HA64 309 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 SMURF1Q9HCE7 757 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 RBFOX1Q9NWB1 397 aaKnown RBP16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 ABRACLQ9P1F3 81 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 USF3Q68DE3 2245 aa16.01■□□□□ 0.15
CHMP4A-201ENST00000347519 A0A075B6Q4 140 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 hCG_1807616A0A1W2PRN6 198 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 HTR3BO95264 441 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 CYB5R3P00387 301 aaPredicted RBP16■□□□□ 0.15
CHMP4A-201ENST00000347519 TNFRSF1AP19438 455 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 SERPINA2P20848 420 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 COL8A2P25067 703 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 ERVK11-1P61568 191 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 FAM201AQ5SY85 155 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 POC1AQ8NBT0 407 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 Q8TCH9 128 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 LRRC29Q8WV35 223 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 KCTD12Q96CX2 325 aaKnown RBP16■□□□□ 0.15
CHMP4A-201ENST00000347519 METTL9Q9H1A3 318 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 WDR13Q9H1Z4 485 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 PTTG2Q9NZH5 202 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 IL36RNQ9UBH0 155 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 FBXO9Q9UK97 447 aaPredicted RBP16■□□□□ 0.15
CHMP4A-201ENST00000347519 PPP1R3CQ9UQK1 317 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 HPGDSO60760 199 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 BMP4P12644 408 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 BMXP51813 675 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 RSU1Q15404 277 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 GCSAMQ8N6F7 178 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 C19orf18Q8NEA5 215 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 SLC25A38Q96DW6 304 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 CYYR1Q96J86 154 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 CEP19Q96LK0 163 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 GAL3ST1Q99999 423 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 NRIP2Q9BQI9 281 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 IL36GQ9NZH8 169 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 SPATA2Q9UM82 520 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 POLDIP2Q9Y2S7 368 aa16■□□□□ 0.15
CHMP4A-201ENST00000347519 TRAPPC2LH3BP13 241 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 NOS1APO75052 506 aaPredicted RBP15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 MPIG6BO95866 241 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 LHBP01229 141 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 ACAA1P09110 424 aaPredicted RBP15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 UBBP0CG47 229 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 BOLLQ8N9W6 283 aaKnown RBP15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 Q8NFD4 153 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 OR10Z1Q8NGY1 313 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 NEU4Q8WWR8 484 aaPredicted RBP15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 ACOT12Q8WYK0 555 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 AP3S1Q92572 193 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 ERGIC1Q969X5 290 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 S100A13Q99584 98 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 C6orf62Q9GZU0 229 aaPredicted RBP15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 ZNF581Q9P0T4 197 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 GHRLQ9UBU3 117 aa15.99■□□□□ 0.15
CHMP4A-201ENST00000347519 A0A0A6YYD4 124 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 IGHV1-69-2A0A0G2JMI3 117 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 SRRM5B3KS81 715 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 TMEM127O75204 238 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 CRTAPO75718 401 aaPredicted RBP15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 ZNF205O95201 554 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 CYB5AP00167 134 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 EIF4EP06730 217 aaKnown RBP15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 CD80P33681 288 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 CFHR2P36980 270 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 SNU13P55769 128 aaKnown RBP15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 DYNC1I2Q13409 638 aaKnown RBP15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 OR2W3Q7Z3T1 314 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 LAX1Q8IWV1 398 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 SAMD12Q8N8I0 201 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 MMP27Q9H306 513 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 HES4Q9HCC6 221 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 RNF7Q9UBF6 113 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 FBLN5Q9UBX5 448 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 PLEKHA6Q9Y2H5 1048 aa15.98■□□□□ 0.15
CHMP4A-201ENST00000347519 RP2O75695 350 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 CLPXO76031 633 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 TFF1P04155 84 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 MGMTP16455 207 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 PDCD1Q15116 288 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 PIGYQ3MUY2 71 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 ELP2Q6IA86 826 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 MZT2AQ6P582 158 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 RTN4RL2Q86UN3 420 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 LURAP1LQ8IV03 231 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 CMTM4Q8IZR5 234 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 DTX3Q8N9I9 347 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 OR11L1Q8NGX0 322 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 CCL17Q92583 94 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 NICN1Q9BSH3 213 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 LPAR5Q9H1C0 372 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 HMG20AQ9NP66 347 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 TMEM106BQ9NUM4 274 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 RAB22AQ9UL26 194 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms