RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 LAIR2Q6ISS4 152 aa16.34■□□□□ 0.21
CLTA-202ENST00000345519 CRIP3Q6Q6R5 217 aa16.34■□□□□ 0.21
CLTA-202ENST00000345519 BCL6BQ8N143 479 aaPredicted RBP16.34■□□□□ 0.21
CLTA-202ENST00000345519 C22orf15Q8WYQ4 148 aa16.34■□□□□ 0.21
CLTA-202ENST00000345519 SPSB1Q96BD6 273 aa16.34■□□□□ 0.21
CLTA-202ENST00000345519 ZMAT3Q9HA38 289 aaKnown RBP16.34■□□□□ 0.21
CLTA-202ENST00000345519 SLC25A10Q9UBX3 287 aaPredicted RBP16.34■□□□□ 0.21
CLTA-202ENST00000345519 DIMT1Q9UNQ2 313 aaKnown RBP16.34■□□□□ 0.21
CLTA-202ENST00000345519 E9PI62 339 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 TFF1P04155 84 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 CCDC159P0C7I6 412 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 PIPP12273 146 aaPredicted RBP16.33■□□□□ 0.2
CLTA-202ENST00000345519 GMFBP60983 142 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 IKZF1Q13422 519 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 CCDC58Q4VC31 144 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 METTL11BQ5VVY1 283 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 C1orf122Q6ZSJ8 110 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 ZNF561Q8N587 486 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 PARP16Q8N5Y8 322 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 CD177Q8N6Q3 437 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.33■□□□□ 0.2
CLTA-202ENST00000345519 ZNF485Q8NCK3 441 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 CYGBQ8WWM9 190 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 ZNF488Q96MN9 340 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 MTCH1Q9NZJ7 389 aa16.33■□□□□ 0.2
CLTA-202ENST00000345519 CAB39Q9Y376 341 aaPredicted RBP16.33■□□□□ 0.2
CLTA-202ENST00000345519 TRBV23-1A0A0A0MS06 115 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 CENPVL3A0A0U1RRI6 287 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 H3BSH0 61 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 TRIM77I1YAP6 450 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 KNG1P01042 644 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 GNAO1P09471 354 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 COMPP49747 757 aaPredicted RBP16.32■□□□□ 0.2
CLTA-202ENST00000345519 RBP2P50120 134 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 UBA52P62987 128 aaKnown RBP16.32■□□□□ 0.2
CLTA-202ENST00000345519 GPR157Q5UAW9 335 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 ZNF529Q6P280 563 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 ANGPTL5Q86XS5 388 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 Q8N7P7 452 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 SIGLECL1Q8N7X8 197 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 ZNRF1Q8ND25 227 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 TRMT10AQ8TBZ6 339 aaKnown RBP16.32■□□□□ 0.2
CLTA-202ENST00000345519 BORCS8Q96FH0 119 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 PCGF1Q9BSM1 259 aa16.32■□□□□ 0.2
CLTA-202ENST00000345519 MS4A7Q9GZW8 240 aaPredicted RBP16.32■□□□□ 0.2
CLTA-202ENST00000345519 FBN3Q75N90 2809 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 FAM230AA0A1W2PPH8 454 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 RFPL4AA6NLU0 287 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 RFPL4AL1F8VTS6 287 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 NXPH2O95156 264 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 ATF1P18846 271 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 AZGP1P25311 298 aaKnown RBP16.31■□□□□ 0.2
CLTA-202ENST00000345519 ETV1P50549 477 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 LHFPL2Q6ZUX7 228 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 TFAP2CQ92754 450 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 FGGYQ96C11 551 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 CEP19Q96LK0 163 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 FAM234AQ9H0X4 552 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 PLCXD1Q9NUJ7 323 aa16.31■□□□□ 0.2
CLTA-202ENST00000345519 CNOT2Q9NZN8 540 aaKnown RBP16.31■□□□□ 0.2
CLTA-202ENST00000345519 NKX1-2Q9UD57 310 aaPredicted RBP16.31■□□□□ 0.2
CLTA-202ENST00000345519 DNAJC9-AS1A6NH13 148 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 F8VVB4 439 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 F8VWA3 439 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 H0YJX3 145 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 M0R1W7 72 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 PRKACBP22694 351 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 ARF6P62330 175 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 CDK5R1Q15078 307 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 XAF1Q6GPH4 301 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 RPL22L1Q6P5R6 122 aaKnown RBP16.3■□□□□ 0.2
CLTA-202ENST00000345519 Q8IYB0 196 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 C8orf59Q8N0T1 100 aaPredicted RBP16.3■□□□□ 0.2
CLTA-202ENST00000345519 ZNF676Q8N7Q3 588 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 OR52N1Q8NH53 320 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 OR5AK2Q8NH90 309 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 NPRL2Q8WTW4 380 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 RGP1Q92546 391 aaPredicted RBP16.3■□□□□ 0.2
CLTA-202ENST00000345519 TNFRSF14Q92956 283 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 OPALINQ96PE5 141 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 PDCD1LG2Q9BQ51 273 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 FKBP14Q9NWM8 211 aa16.3■□□□□ 0.2
CLTA-202ENST00000345519 EXOSC1Q9Y3B2 195 aaKnown RBP16.3■□□□□ 0.2
CLTA-202ENST00000345519 IGHV1-69DA0A0B4J2H0 117 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 TRBV2A0A0J9YWF9 115 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 TMEM89A2RUT3 159 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 ZNF737O75373 536 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 RGS9O75916 674 aaPredicted RBP16.29■□□□□ 0.2
CLTA-202ENST00000345519 IGHV1-69P01742 117 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 ZNF20P17024 532 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 PRTN3P24158 256 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 PRDX2P32119 198 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 GABRA2P47869 451 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 GBX2P52951 348 aaPredicted RBP16.29■□□□□ 0.2
CLTA-202ENST00000345519 ATP1B3P54709 279 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 SLC34A1Q06495 639 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 BRD3OSQ6XYD6 125 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 VMO1Q7Z5L0 202 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 OR13C3Q8NGS6 347 aa16.29■□□□□ 0.2
CLTA-202ENST00000345519 COMMD4Q9H0A8 199 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms