RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DMRTC1Q5HYR2 192 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 DPPA3Q6W0C5 159 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 ADPRHL1Q8NDY3 354 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 SF3B6Q9Y3B4 125 aaKnown RBP16.09■□□□□ 0.17
SMC4-201ENST00000344722 RNASEKQ6P5S7 137 aaKnown RBP16.09■□□□□ 0.17
SMC4-201ENST00000344722 LINC01555Q8NAE3 123 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 OR10G4Q8NGN3 311 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 OR10G9Q8NGN4 311 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 OR10G7Q8NGN6 311 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 OIT3Q8WWZ8 545 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 DYRK2Q92630 601 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 PTX4Q96A99 478 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 TLNRD1Q9H1K6 362 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 FUT9Q9Y231 359 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 PDE4DIPQ5VU43 2346 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 CA3P07451 260 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 FCER1GP30273 86 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 ARR3P36575 388 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 POLR2GP62487 172 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMC4-201ENST00000344722 FMODQ06828 376 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 GCGP01275 180 aa16.08■□□□□ 0.17
SMC4-201ENST00000344722 RAC1P63000 192 aa16.08■□□□□ 0.17
SMC4-201ENST00000344722 NHLRC2Q8NBF2 726 aa16.08■□□□□ 0.17
SMC4-201ENST00000344722 FAM173AQ9BQD7 235 aa16.08■□□□□ 0.17
SMC4-201ENST00000344722 COL18A1P39060 1754 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 AMTP48728 403 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 CDC34P49427 236 aaPredicted RBP16.08■□□□□ 0.16
SMC4-201ENST00000344722 MICBQ29980 383 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 ZNF468Q5VIY5 522 aaPredicted RBP16.08■□□□□ 0.16
SMC4-201ENST00000344722 LAMTOR1Q6IAA8 161 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 OR5AU1Q8NGC0 362 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 RLN3Q8WXF3 142 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 A6NCN8 305 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 H0Y8X5 98 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 EFNB2P52799 333 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 PHOSPHO2Q8TCD6 241 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 PATE1Q8WXA2 126 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 SLC31A2O15432 143 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 ENSAO43768 121 aaKnown RBP16.08■□□□□ 0.16
SMC4-201ENST00000344722 LSM11P83369 360 aaKnown RBP eCLIP16.08■□□□□ 0.167e-97■■■■■ 245.7
SMC4-201ENST00000344722 EWSR1Q01844 656 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMC4-201ENST00000344722 OR8G1Q15617 311 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 KHDC3LQ587J8 217 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 COL5A1-AS1Q5SY13 56 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 C17orf78Q8N4C9 275 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 FLRT3Q9NZU0 649 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 ANXA10Q9UJ72 324 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 ZNF391Q9UJN7 358 aa16.08■□□□□ 0.16
SMC4-201ENST00000344722 HOXB1P14653 301 aaPredicted RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 ARSJQ5FYB0 599 aaPredicted RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 NUFIP2Q7Z417 695 aaKnown RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 MRPL24Q96A35 216 aaKnown RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 GSX1Q9H4S2 264 aaPredicted RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 RCC2Q9P258 522 aaKnown RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 OR5I1Q13606 314 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 ZNF385CQ66K41 422 aaPredicted RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 METTL1Q9UBP6 276 aaKnown RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 ZNF816Q0VGE8 651 aaPredicted RBP16.07■□□□□ 0.16
SMC4-201ENST00000344722 TRIM61Q5EBN2 209 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 MRGPRGQ86SM5 289 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 M1APQ8TC57 530 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 RAB24Q969Q5 203 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 SLC25A22Q9H936 323 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 CTLA4P16410 223 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 PRR27Q6MZM9 219 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 LRP11Q86VZ4 500 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 CCL4L1Q8NHW4 92 aa16.07■□□□□ 0.16
SMC4-201ENST00000344722 TEX50A0A1B0GTY4 177 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 DBX1A6NMT0 343 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 PLRG1O43660 514 aaKnown RBP16.06■□□□□ 0.16
SMC4-201ENST00000344722 CDX1P47902 265 aaPredicted RBP16.06■□□□□ 0.16
SMC4-201ENST00000344722 CSNK1EP49674 416 aaKnown RBP16.06■□□□□ 0.16
SMC4-201ENST00000344722 GNG4P50150 75 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 B2MP61769 119 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 TCTN1Q2MV58 587 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 MESTQ5EB52 335 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 OR5AS1Q8N127 324 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 ZNRF4Q8WWF5 429 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 MOGAT1Q96PD6 335 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 A8MXK9 166 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 TOX3O15405 576 aaPredicted RBP16.06■□□□□ 0.16
SMC4-201ENST00000344722 C1QCP02747 245 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 HLA-GP17693 338 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 RCC1P18754 421 aaPredicted RBP16.06■□□□□ 0.16
SMC4-201ENST00000344722 FAM3BP58499 235 aaPredicted RBP16.06■□□□□ 0.16
SMC4-201ENST00000344722 LINC00469Q8N7U9 141 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 ELOVL1Q9BW60 279 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 LOC102723971A0A1B0GUV8 181 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 C5orf49A4QMS7 147 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 TCF21O43680 179 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 OR2A4O95047 310 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 OR2A7Q96R45 310 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 TMEM147Q9BVK8 224 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 ZNF552Q9H707 407 aaPredicted RBP16.06■□□□□ 0.16
SMC4-201ENST00000344722 KLK13Q9UKR3 277 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 SERTM2A0A1B0GWG4 89 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 PDCD6O75340 191 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 ZBTB25P24278 435 aa16.06■□□□□ 0.16
SMC4-201ENST00000344722 IL3RAP26951 378 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms