RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 ZNF727A8MUV8 499 aa19.57■□□□□ 0.72
TRIM28-202ENST00000341753 IGHG1P01857 330 aa19.57■□□□□ 0.72
TRIM28-202ENST00000341753 RPS10P46783 165 aaKnown RBP19.57■□□□□ 0.72
TRIM28-202ENST00000341753 NOVA1P51513 510 aaKnown RBP19.57■□□□□ 0.72
TRIM28-202ENST00000341753 RPS23P62266 143 aaKnown RBP19.57■□□□□ 0.72
TRIM28-202ENST00000341753 SMAD4Q13485 552 aaKnown RBP19.57■□□□□ 0.72
TRIM28-202ENST00000341753 OGFOD3Q6PK18 319 aa19.57■□□□□ 0.72
TRIM28-202ENST00000341753 OR52M1Q8NGK5 317 aa19.57■□□□□ 0.72
TRIM28-202ENST00000341753 QDPRP09417 244 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 ZNF84P51523 738 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 C17orf67Q0P5P2 114 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 CHAF1BQ13112 559 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 SURF2Q15527 256 aaPredicted RBP19.56■□□□□ 0.72
TRIM28-202ENST00000341753 ZNF600Q6ZNG1 722 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 C20orf196Q8IYI0 205 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 OR1J1Q8NGS3 322 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 SLC22A8Q8TCC7 542 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 PAPOLGQ9BWT3 736 aaKnown RBP19.56■□□□□ 0.72
TRIM28-202ENST00000341753 BORCS7-ASMTA0A0B4J1R7 106 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 FAM221AA4D161 298 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 OR2C1O95371 312 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 OR5H8P0DN80 308 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 FOSL2P15408 326 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 APCDD1LQ8NCL9 501 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 FAAP24Q9BTP7 215 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 SLC35B3Q9H1N7 401 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 PLEKHA2Q9HB19 425 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 B3GALT1Q9Y5Z6 326 aa19.56■□□□□ 0.72
TRIM28-202ENST00000341753 CTSDP07339 412 aaPredicted RBP19.55■□□□□ 0.72
TRIM28-202ENST00000341753 OR2B11Q5JQS5 317 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 WDSUB1Q8N9V3 476 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 SLC39A7Q92504 469 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 SLAMF9Q96A28 289 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 UBE2ZQ9H832 354 aaPredicted RBP19.55■□□□□ 0.72
TRIM28-202ENST00000341753 KLRF1Q9NZS2 232 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 E5RGE8 158 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 ANGPTL7O43827 346 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 SEC11BP0C7V7 166 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 SFTPDP35247 375 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 KIAA0141Q14154 515 aaPredicted RBP19.55■□□□□ 0.72
TRIM28-202ENST00000341753 OR5L1Q8NGL2 311 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 ABHD14AQ9BUJ0 271 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 ARV1Q9H2C2 271 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 TMPRSS5Q9H3S3 457 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 NSG2Q9Y328 171 aa19.55■□□□□ 0.72
TRIM28-202ENST00000341753 NPIPB13A6NJU9 1138 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 SERPINE3A8MV23 424 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 NPIPB4C9JG80 1138 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 CCL20P78556 96 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 ZNF850A8MQ14 1090 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 PRF1P14222 555 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 PMELP40967 661 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 P2RY1P47900 373 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 STARD6P59095 220 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 HPSE2Q8WWQ2 592 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 TOLLIPQ9H0E2 274 aa19.54■□□□□ 0.72
TRIM28-202ENST00000341753 TRAF3IP2O43734 574 aaPredicted RBP19.53■□□□□ 0.72
TRIM28-202ENST00000341753 LY86O95711 162 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 FBP1P09467 338 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 RHEBQ15382 184 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 GINS3Q9BRX5 216 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 FSCN3Q9NQT6 498 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 FGF21Q9NSA1 209 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 URGCP-MRPS24S4R325 110 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 IFITM10A6NMD0 228 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 CCL1P22362 96 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 UCP2P55851 309 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 NDUFA6P56556 154 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 RAB2AP61019 212 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 CLINT1Q14677 625 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 FAM189A2Q15884 450 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 TAF9Q16594 264 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 ABCA11PQ4W5N1 156 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 ZNF343Q6P1L6 599 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 SGK3Q96BR1 496 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 ANXA10Q9UJ72 324 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 PIGLQ9Y2B2 252 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 HDGFL3Q9Y3E1 203 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 FREM2Q5SZK8 3169 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 OR5H15A6NDH6 313 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 CDRT15L2A8MXV6 281 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 IFNA17P01571 189 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 ZNF43P17038 809 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 SOHLH1Q5JUK2 328 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 SLC25A47Q6Q0C1 308 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 SLC38A9Q8NBW4 561 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 OR11L1Q8NGX0 322 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 RTN4IP1Q8WWV3 396 aaPredicted RBP19.53■□□□□ 0.72
TRIM28-202ENST00000341753 MR1Q95460 341 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 ZNF160Q9HCG1 818 aa19.53■□□□□ 0.72
TRIM28-202ENST00000341753 ADAMTS9Q9P2N4 1935 aa19.52■□□□□ 0.72
TRIM28-202ENST00000341753 NCOA6Q14686 2063 aaPredicted RBP19.52■□□□□ 0.72
TRIM28-202ENST00000341753 CCDC85CA6NKD9 419 aa19.52■□□□□ 0.72
TRIM28-202ENST00000341753 ATXN7O15265 892 aaPredicted RBP19.52■□□□□ 0.72
TRIM28-202ENST00000341753 GPR137BO60478 399 aa19.52■□□□□ 0.72
TRIM28-202ENST00000341753 HAAOP46952 286 aa19.52■□□□□ 0.72
TRIM28-202ENST00000341753 HTR5AP47898 357 aa19.52■□□□□ 0.72
TRIM28-202ENST00000341753 ZNF41P51814 821 aaPredicted RBP19.52■□□□□ 0.72
TRIM28-202ENST00000341753 LRRC18Q8N456 261 aa19.52■□□□□ 0.72
TRIM28-202ENST00000341753 COMMD1Q8N668 190 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms