RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 HNRNPCL2B2RXH8 293 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 HNRNPCL3B7ZW38 293 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 PSMD9O00233 223 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 AZIN1O14977 448 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 HNRNPCL1O60812 293 aaKnown RBP8.17□□□□□ -1.1
ATXN3-201ENST00000340660 MTRF1O75570 445 aaKnown RBP8.17□□□□□ -1.1
ATXN3-201ENST00000340660 OR5F1O95221 314 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 HNRNPCL4P0DMR1 293 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 CLDN8P56748 225 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 NCALDP61601 193 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 UGT3A2Q3SY77 523 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 PVRIGQ6DKI7 326 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 ZYG11AQ6WRX3 759 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 ABHD12Q8N2K0 398 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 Q8N9W7 124 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 ZNF714Q96N38 554 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 LZTFL1Q9NQ48 299 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 LIN7CQ9NUP9 197 aaKnown RBP8.17□□□□□ -1.1
ATXN3-201ENST00000340660 RPS6KA6Q9UK32 745 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 UBE2QL1A1L167 161 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 RFPL4AA6NLU0 287 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 RFPL4AL1F8VTS6 287 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 TPST1O60507 370 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
ATXN3-201ENST00000340660 TSPAN19P0C672 248 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 CPA3P15088 417 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 OTX1P32242 354 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-201ENST00000340660 GNALP38405 381 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 CDKN2CP42773 168 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 NPBWR2P48146 333 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 LSM6P62312 80 aaKnown RBP8.16□□□□□ -1.1
ATXN3-201ENST00000340660 GAGE13Q4V321 117 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 C6orf136Q5SQH8 315 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 CCDC144NLQ6NUI1 221 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 TGIF2LXQ8IUE1 241 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 LAX1Q8IWV1 398 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 ZNF561Q8N587 486 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 CYB561A3Q8NBI2 242 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 FLYWCH2Q96CP2 140 aaKnown RBP8.16□□□□□ -1.1
ATXN3-201ENST00000340660 PPP3R2Q96LZ3 170 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 FGF23Q9GZV9 251 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-201ENST00000340660 ZIM2Q9NZV7 527 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 SLC23A1Q9UHI7 598 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 SNX24Q9Y343 169 aa8.16□□□□□ -1.1
ATXN3-201ENST00000340660 FSIP2Q5CZC0 6907 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 FAM172BPA6NC97 362 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 ANKRD30BLA7E2S9 258 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 TMEM233B4DJY2 109 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 G3V318 75 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 BUB1B-PAK6H3BSN5 160 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 SLC1A7O00341 560 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 DLGAP1O14490 977 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 CHP2O43745 196 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 RBMXL2O75526 392 aaKnown RBP8.15□□□□□ -1.1
ATXN3-201ENST00000340660 IGKV1D-33P01593 117 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 IGKV1-33P01594 117 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 TK1P04183 234 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 CD34P28906 385 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 RPL27P61353 136 aaKnown RBP8.15□□□□□ -1.1
ATXN3-201ENST00000340660 KRTAP15-1Q3LI76 137 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 CORO6Q6QEF8 472 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 ZNF367Q7RTV3 350 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 ZNF596Q8TC21 504 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 PLEKHA1Q9HB21 404 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 MEPEQ9NQ76 525 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-201ENST00000340660 ZNF580Q9UK33 172 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 LHFPL6Q9Y693 200 aa8.15□□□□□ -1.1
ATXN3-201ENST00000340660 FAM90A10PA6NDY2 464 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 CCDC154A6NI56 674 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 OOSP1A8MZH6 123 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 SERPINA1P01009 418 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 CSN3P07498 182 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 ALDOCP09972 364 aaKnown RBP8.14□□□□□ -1.11
ATXN3-201ENST00000340660 OR5H8P0DN80 308 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 KRT4P19013 534 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 DCTDP32321 178 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 CEACAM3P40198 252 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 RGS8P57771 180 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-201ENST00000340660 HLA-DRB5Q30154 266 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 AGBL2Q5U5Z8 902 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 ANXA8L1Q5VT79 327 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 TTC33Q6PID6 262 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-201ENST00000340660 ZDHHC21Q8IVQ6 265 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 FNDC5Q8NAU1 212 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 GJC3Q8NFK1 279 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 OR9G4Q8NGQ1 327 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 TWIST2Q8WVJ9 160 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 PBKQ96KB5 322 aa8.14□□□□□ -1.11
ATXN3-201ENST00000340660 TEX13CA0A0J9YWL9 993 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 FAM183AA6NL82 134 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 NCBP2LA6PVI3 153 aaKnown RBP8.13□□□□□ -1.11
ATXN3-201ENST00000340660 ZNF850A8MQ14 1090 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 C11orf94C9JXX5 98 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 IGHV3-11P01762 117 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 FUT1P19526 365 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 PRDX2P32119 198 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 DR1Q01658 176 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 RAB40BQ12829 278 aa8.13□□□□□ -1.11
ATXN3-201ENST00000340660 CAVIN1Q6NZI2 390 aaKnown RBP8.13□□□□□ -1.11
ATXN3-201ENST00000340660 ACTRT1Q8TDG2 376 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms