RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 PMP22Q01453 160 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 RTP5Q14D33 572 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 MS4A18Q3C1V0 323 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 DDIT4LQ96D03 193 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 SNHG12Q9BXW3 62 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 SYT4Q9H2B2 425 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 LPAR3Q9UBY5 353 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 OR14J1Q9UGF5 321 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 GTF2A1LQ9UNN4 478 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 AMDHD2Q9Y303 409 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 FBXO24O75426 580 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 WISP2O76076 250 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 DXOO77932 396 aaKnown RBP13.23□□□□□ -0.29
BRAT1-201ENST00000340611 AMY2AP04746 511 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 POU3F1Q03052 451 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-201ENST00000340611 TLE3Q04726 772 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 AKR1C8PQ5T2L2 129 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF585AQ6P3V2 769 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF627Q7L945 461 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 LRP11Q86VZ4 500 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF664Q8N3J9 261 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 NMNAT2Q9BZQ4 307 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 LIPT2A6NK58 231 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 TNFSF11O14788 317 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 ITGB2P05107 769 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 TMEM11P17152 192 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 IL2RGP31785 369 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 DSCR4P56555 118 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-201ENST00000340611 C2orf76Q3KRA6 126 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 LRRC69Q6ZNQ3 347 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 C5orf24Q7Z6I8 188 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 OR2M7Q8NG81 312 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 OR6N2Q8NGY6 317 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 UCN2Q96RP3 112 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 NDUFAF3Q9BU61 184 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 TIMM10BQ9Y5J6 103 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 DOCK7Q96N67 2140 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF727A8MUV8 499 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 CBR3O75828 277 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR2C1O95371 312 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 WNT11O96014 354 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 TACSTD2P09758 323 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR8U9P0C7N5 309 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 MAGEA5P43359 124 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 ARG2P78540 354 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 SGCBQ16585 318 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 NKPD1Q17RQ9 610 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 PLPP7Q8NBV4 271 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR5M8Q8NGP6 311 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR8U1Q8NH10 309 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 TSEN15Q8WW01 171 aaKnown RBP13.22□□□□□ -0.29
BRAT1-201ENST00000340611 LIPHQ8WWY8 451 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 CCNL2Q96S94 520 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-201ENST00000340611 TMEM100Q9NV29 134 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 TRBV5-5A0A0J9YX44 114 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR5H15A6NDH6 313 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR5H1A6NKK0 313 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR4C45A6NMZ5 311 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 PMS2P2O95744 297 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 HLA-AP01891 365 aaKnown RBP13.22□□□□□ -0.29
BRAT1-201ENST00000340611 FMODQ06828 376 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 DHRS2Q13268 280 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 TMPPEQ6ZT21 453 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 DPY19L4Q7Z388 723 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 OR14K1Q8NGZ2 314 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 PPP1R14AQ96A00 147 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 SERINC1Q9NRX5 453 aa13.22□□□□□ -0.29
BRAT1-201ENST00000340611 NBEAQ8NFP9 2946 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 C5orf51A6NDU8 294 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 DLEU1O43261 78 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 SPARCP09486 303 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 SLC25A53Q5H9E4 307 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 ATPAF1Q5TC12 328 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF343Q6P1L6 599 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-201ENST00000340611 FAM3DQ96BQ1 224 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 WDR76Q9H967 626 aa13.21□□□□□ -0.29
BRAT1-201ENST00000340611 A0A0J9YW62 118 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 SEC14L6B5MCN3 397 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF587BE7ETH6 402 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 MFNGO00587 321 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 ABHD16AO95870 558 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 SRYQ05066 204 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 C3AR1Q16581 482 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 LPCAT3Q6P1A2 487 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 SLC16A9Q7RTY1 509 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 CPEB3Q8NE35 698 aaKnown RBP13.21□□□□□ -0.3
BRAT1-201ENST00000340611 ROBO4Q8WZ75 1007 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 NTNG2Q96CW9 530 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 CBLN4Q9NTU7 201 aa13.21□□□□□ -0.3
BRAT1-201ENST00000340611 ETV2O00321 342 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 CD8AP01732 235 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 SUCLG1P53597 346 aaKnown RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 B3GALT5-AS1P59052 145 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 CARD17Q5XLA6 110 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 PACRGQ96M98 296 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms