RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 IGHV3OR16-10A0A075B7F0 116 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 IGHV1-69DA0A0B4J2H0 117 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 CENPVL3A0A0U1RRI6 287 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 A0A1B0GW55 424 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 SLC16A6O15403 523 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 IGHV1-69P01742 117 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 ISG15P05161 165 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4L2P0CJ85 424 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4L3P0CJ86 424 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4L4P0CJ87 422 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4L5P0CJ88 424 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4L6P0CJ89 424 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4L7P0CJ90 424 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 PGA5P0DJD9 388 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 HKR1P10072 659 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 PSG2P11465 335 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 AMY2BP19961 511 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 CCR9P51686 369 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 ARF6P62330 175 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 FOXL1Q12952 345 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 IL24Q13007 206 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 MRPL28Q13084 256 aaKnown RBP11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DGUOKQ16854 277 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4L9Q6RFH8 374 aaPredicted RBP11□□□□□ -0.65
SIRPB3P-201ENST00000340424 BRD3OSQ6XYD6 125 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 ACP7Q6ZNF0 438 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 ZNF561Q8N587 486 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 RHOXF1Q8NHV9 184 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 HAVCR2Q8TDQ0 301 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 NPRL2Q8WTW4 380 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 UBE2FQ969M7 185 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 SEH1LQ96EE3 360 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 NRIP2Q9BQI9 281 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 YTHDF1Q9BYJ9 559 aaKnown RBP11□□□□□ -0.65
SIRPB3P-201ENST00000340424 GPR173Q9NS66 373 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 ONECUT1Q9UBC0 465 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 DUX4Q9UBX2 424 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 ZNF222Q9UK12 451 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 EXOGQ9Y2C4 368 aaKnown RBP11□□□□□ -0.65
SIRPB3P-201ENST00000340424 MYRFQ9Y2G1 1151 aa11□□□□□ -0.65
SIRPB3P-201ENST00000340424 LOC100130705A0A1B0GUX0 176 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 LOC107986453A0A1B0GWG9 222 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 M0R1W7 72 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 SLC1A7O00341 560 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 NXPH2O95156 264 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 FADS2O95864 444 aaKnown RBP10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 GABRB1P18505 474 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 GABRA2P47869 451 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 FUT6P51993 359 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 ZNF91Q05481 1191 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 RAB40BQ12829 278 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 CNN3Q15417 329 aaKnown RBP10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 SLC9A3R2Q15599 337 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 TP53I3Q53FA7 332 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 VMO1Q7Z5L0 202 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 ENTHD1Q8IYW4 607 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 SYS1Q8N2H4 156 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 PRSS35Q8N3Z0 413 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 DNAAF1Q8NEP3 725 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 TSPAN14Q8NG11 270 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 OR2G2Q8NGZ5 317 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 TBC1D15Q8TC07 691 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 H1FXQ92522 213 aaKnown RBP10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 C1orf147Q96MC9 270 aaPredicted RBP10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 HES4Q9HCC6 221 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 CAB39Q9Y376 341 aaPredicted RBP10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 RPL36Q9Y3U8 105 aaKnown RBP10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 POMT1Q9Y6A1 747 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 CEPT1Q9Y6K0 416 aa10.99□□□□□ -0.65
SIRPB3P-201ENST00000340424 TENM1Q9UKZ4 2725 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 A0A1W2PPH5 198 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 A0A1W2PQ09 198 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 HTR1AP08908 422 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 DBTP11182 482 aaKnown RBP10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 NDUFB7P17568 137 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 CFPP27918 469 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 RPL15P61313 204 aaKnown RBP10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 GALEQ14376 348 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 ODF4Q2M2E3 257 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 DEFB112Q30KQ8 113 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 NCR3LG1Q68D85 454 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 Q6YL49 198 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 UTS2BQ765I0 119 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 C3orf56Q8N813 242 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 ZNF555Q8NEP9 628 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 TMEM185AQ8NFB2 350 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 LHX4Q969G2 390 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 LGALS12Q96DT0 336 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 SLC29A1Q99808 456 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 FAM234AQ9H0X4 552 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 METTL8Q9H825 291 aaKnown RBP10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 UNKLQ9H9P5 680 aaKnown RBP10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 FAM118AQ9NWS6 357 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 SMPD3Q9NY59 655 aaPredicted RBP10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 ETAA1Q9NY74 926 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 PCDHGB5Q9Y5G0 923 aa10.98□□□□□ -0.65
SIRPB3P-201ENST00000340424 A0A087WXM4 84 aa10.97□□□□□ -0.65
SIRPB3P-201ENST00000340424 A6NJY4 79 aa10.97□□□□□ -0.65
SIRPB3P-201ENST00000340424 RFPL4AA6NLU0 287 aa10.97□□□□□ -0.65
SIRPB3P-201ENST00000340424 RFPL4AL1F8VTS6 287 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms