RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 RASL12Q9NYN1 266 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 INSIG2Q9Y5U4 225 aa12.68□□□□□ -0.38
UBE3B-201ENST00000340074 J3QLI3 93 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 INMTO95050 263 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 NXPH2O95156 264 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 MT-ND2P03891 347 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 FAM157CP0CG43 387 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 PSG2P11465 335 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 SRD5A1P18405 259 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 CELP19835 753 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 MTCP1P56278 107 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 IRF3Q14653 427 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 ATPAF1Q5TC12 328 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-201ENST00000340074 RNF144BQ7Z419 303 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 FGFRL1Q8N441 504 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 FAM216BQ8N7L0 139 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 TMEM106AQ96A25 262 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 RFT1Q96AA3 541 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 OR5M11Q96RB7 305 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 NRIP2Q9BQI9 281 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 MTCH1Q9NZJ7 389 aa12.67□□□□□ -0.38
UBE3B-201ENST00000340074 JMJD1CQ15652 2540 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 IGKV1D-17A0A075B6S4 117 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 LOC105371242A0A075B767 164 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 IGHV2-70DA0A0C4DH43 119 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 F8VVB4 439 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 F8VWA3 439 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 RGS10O43665 173 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 SULT1B1O43704 296 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 CD2P06729 351 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 ACAA1P09110 424 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-201ENST00000340074 SRP14P37108 136 aaKnown RBP12.66□□□□□ -0.38
UBE3B-201ENST00000340074 GABRA2P47869 451 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 RPS11P62280 158 aaKnown RBP eCLIP12.66□□□□□ -0.38
UBE3B-201ENST00000340074 IKZF1Q13422 519 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 SMIM21Q3B7S5 101 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 YIF1BQ5BJH7 314 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 RBM48Q5RL73 367 aaKnown RBP12.66□□□□□ -0.38
UBE3B-201ENST00000340074 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 ZNF788Q6ZQV5 615 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 SLC25A26Q70HW3 274 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 RAB40AQ8WXH6 277 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 SLAMF9Q96A28 289 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 DACT3Q96B18 629 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-201ENST00000340074 GAFA1Q96PS6 74 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 CCDC90BQ9GZT6 254 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 DNTTIP1Q9H147 329 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 HES4Q9HCC6 221 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 TAS2R4Q9NYW5 299 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 OPN4Q9UHM6 478 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 LSM2Q9Y333 95 aaKnown RBP12.66□□□□□ -0.38
UBE3B-201ENST00000340074 DSCAML1Q8TD84 2053 aa12.66□□□□□ -0.38
UBE3B-201ENST00000340074 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 NKX6-3A6NJ46 265 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 RFPL4AA6NLU0 287 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 C22orf46C9J442 243 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 RFPL4AL1F8VTS6 287 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 DENRO43583 198 aaKnown RBP12.65□□□□□ -0.38
UBE3B-201ENST00000340074 SPRY1O43609 319 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-201ENST00000340074 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
UBE3B-201ENST00000340074 ALX3O95076 343 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 HCKP08631 526 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 SELLP14151 372 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 ADRA2CP18825 462 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 RAB3AP20336 220 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 POU3F4P49335 361 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 ACSM1Q08AH1 577 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 SPHARQ15513 63 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 MED22Q15528 200 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 DGUOKQ16854 277 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 ZNF529Q6P280 563 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 CRIP3Q6Q6R5 217 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 BTNL3Q6UXE8 466 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 PRIMA1Q86XR5 153 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 OR51A2Q8NGJ7 313 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 ST8SIA4Q92187 359 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 CEP19Q96LK0 163 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 NUDT16L1Q9BRJ7 211 aaKnown RBP12.65□□□□□ -0.38
UBE3B-201ENST00000340074 Q9H521 79 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 ZNF222Q9UK12 451 aa12.65□□□□□ -0.38
UBE3B-201ENST00000340074 NDUFB3O43676 98 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 NPBWR2P48146 333 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 IL13RA1P78552 427 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 BDH1Q02338 343 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 PAX8Q06710 450 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 PDZK1IP1Q13113 114 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 Q499Y3 187 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 CD276Q5ZPR3 534 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 BTN2A1Q7KYR7 527 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 PRSS48Q7RTY5 328 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 MKXQ8IYA7 352 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 CD177Q8N6Q3 437 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 ORAI1Q96D31 301 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 MED30Q96HR3 178 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 MRI1Q9BV20 369 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 NEK6Q9HC98 313 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
UBE3B-201ENST00000340074 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms