RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 A0A087WZY1 265 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 CDRT15L2A8MXV6 281 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 GPR37O15354 613 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 FOLR3P41439 243 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 SLC35A1P78382 337 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 SNAI3Q3KNW1 292 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 HIST2H3PS2Q5TEC6 136 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 ZNF468Q5VIY5 522 aaPredicted RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 ZNF574Q6ZN55 896 aaPredicted RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 PGAP1Q75T13 922 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 CXorf67Q86X51 503 aaPredicted RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 ZNF100Q8IYN0 542 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 NAA11Q9BSU3 229 aaPredicted RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 METTL9Q9H1A3 318 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 CLPSP04118 112 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 OR5AC1P0C628 307 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 NPBWR1P48145 328 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 UBE2KP61086 200 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 DOK3Q7L591 496 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 LYZL2Q7Z4W2 148 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 RRNAD1Q96FB5 475 aaKnown RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 OXGR1Q96P68 337 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 SLCO5A1Q9H2Y9 848 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 OBSL1O75147 1896 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 C5orf49A4QMS7 147 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 CSRP2Q16527 193 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 TMEM268Q5VZI3 342 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 MRPL21Q7Z2W9 205 aaKnown RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 MAML2Q8IZL2 1156 aaPredicted RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 TMEM123Q8N131 208 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 D2HGDHQ8N465 521 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 ZSCAN4Q8NAM6 433 aaPredicted RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 AGBL5Q8NDL9 886 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 MITD1Q8WV92 249 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 FRZBQ92765 325 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 MVB12AQ96EY5 273 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 EXOSC3Q9NQT5 275 aaKnown RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 TMEM218A2RU14 115 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 DHRS7CA6NNS2 312 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 ZNF705FA8MVS1 300 aaPredicted RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 LAMTOR5O43504 91 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 IFNA2P01563 188 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 CHRM2P08172 466 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 ZNF705DP0CH99 300 aaPredicted RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 ZNF705BP0CI00 300 aaPredicted RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 OPN5Q6U736 354 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 PAQR4Q8N4S7 273 aaPredicted RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 KCNK17Q96T54 332 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 FBXL17Q9UF56 701 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 RNF150Q9ULK6 438 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 IGKV1D-8A0A087WSZ0 117 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 SSSCA1O60232 199 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 MRPL33O75394 65 aaKnown RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 HAAOP46952 286 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 MALLQ13021 153 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 RBMS3Q6XE24 437 aaKnown RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 HSD17B13Q7Z5P4 300 aaPredicted RBP10.49□□□□□ -0.73
USP1-201ENST00000339950 LRP11Q86VZ4 500 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 OR10S1Q8NGN2 331 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 EDAQ92838 391 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 HLA-CQ95604 372 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 PBDC1Q9BVG4 233 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 REG4Q9BYZ8 158 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 LRFN1Q9P244 771 aa10.49□□□□□ -0.73
USP1-201ENST00000339950 CCDC187A0A096LP49 1063 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 AQP8O94778 261 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 SCAF4O95104 1147 aaKnown RBP10.48□□□□□ -0.73
USP1-201ENST00000339950 BPNT1O95861 308 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 HPP00738 406 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 SFTA3P0C7M3 94 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 TMEM50BP56557 158 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 TAS2R31P59538 309 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 UBE2V2Q15819 145 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 RHBDD2Q6NTF9 364 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 DPPA2Q7Z7J5 298 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 OR13G1Q8NGZ3 307 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 C5orf66Q9H5L9 145 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 TNFSF18Q9UNG2 199 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 WDFY3Q8IZQ1 3526 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 IGHV5-10-1A0A0J9YXX1 117 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 A0A1W2PR77 199 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 ATXN7O15265 892 aaPredicted RBP10.48□□□□□ -0.73
USP1-201ENST00000339950 HPNP05981 417 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 ZBTB25P24278 435 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 CLDN15P56746 228 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 CYB5R2Q6BCY4 276 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 JMJD6Q6NYC1 403 aaPredicted RBP10.48□□□□□ -0.73
USP1-201ENST00000339950 SLC25A42Q86VD7 318 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 UBAC2Q8NBM4 344 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 GLYATL2Q8WU03 294 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 MRGPRX4Q96LA9 322 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 SHARPINQ9H0F6 387 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 DEFB127Q9H1M4 99 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 UFSP2Q9NUQ7 469 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 RASL12Q9NYN1 266 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 GHRLQ9UBU3 117 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 NBEAQ8NFP9 2946 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 A0A0J9YW62 118 aa10.48□□□□□ -0.73
USP1-201ENST00000339950 FAM24AA6NFZ4 105 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms