RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 OOEPA6NGQ2 149 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 TRAPPC2LH3BP13 241 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 PDCD5O14737 125 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 NOS1APO75052 506 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 NXPH2O95156 264 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 IGKV1D-12P01611 117 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 ACAA1P09110 424 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 BCL3P20749 454 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 MDH2P40926 338 aaKnown RBP11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 PTGFRP43088 359 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 NPBWR2P48146 333 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 LSM3P62310 102 aaKnown RBP11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 GDPGP1Q6ZNW5 385 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 SAXO1Q8IYX7 474 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 FOXRED1Q96CU9 486 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 KCTD7Q96MP8 289 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 REG4Q9BYZ8 158 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 CNTD2Q9H8S5 307 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 ELL3Q9HB65 397 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 SMURF1Q9HCE7 757 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 RASL12Q9NYN1 266 aa11.8□□□□□ -0.52
APOBEC3B-202ENST00000335760 F8VVB4 439 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 F8VWA3 439 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 MUC1P15941 1255 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 USF1P22415 310 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 ERVK11-1P61568 191 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 MICBQ29980 383 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 ZNF404Q494X3 552 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 GPR107Q5VW38 600 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 ACP7Q6ZNF0 438 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 C1QL2Q7Z5L3 287 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 LYPD6Q86Y78 171 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 MUC20Q8N307 709 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 PXT1Q8NFP0 134 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 S100A13Q99584 98 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 GFI1Q99684 422 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 TMEM246Q9BRR3 403 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 UQCC2Q9BRT2 126 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 MRPS28Q9Y2Q9 187 aaKnown RBP11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 CCDC168Q8NDH2 2452 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 KDM4BO94953 1096 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 CDRT1O95170 752 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 FSTL3O95633 263 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 GYPAP02724 150 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 CALCBP10092 127 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 RAB3BP20337 219 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 TGFBR1P36897 503 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 MTNR1BP49286 362 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 RSU1Q15404 277 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 KCNJ8Q15842 424 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 SMIM21Q3B7S5 101 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 TMEM155Q4W5P6 130 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 GLIPR1L1Q6UWM5 242 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 ASCL4Q6XD76 172 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 FAM90A1Q86YD7 464 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 ANKRD13BQ86YJ7 626 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 Q8IYB0 196 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 SPICQ8N5J4 248 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 OR5T2Q8NGG2 359 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 OR4D6Q8NGJ1 314 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 CLDND2Q8NHS1 167 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 METTL9Q9H1A3 318 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 HES4Q9HCC6 221 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 RBFOX1Q9NWB1 397 aaKnown RBP11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 NLKQ9UBE8 527 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 PCDHB10Q9UN67 800 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 V9GY05 133 aa11.79□□□□□ -0.52
APOBEC3B-202ENST00000335760 A0A096LNT2 108 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 SMIM30A4D0T7 59 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 CEACAM18A8MTB9 384 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 H7C1Q1 480 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 SFTPBP07988 381 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 CD37P11049 281 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 PRKACAP17612 351 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 SDC2P34741 201 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 PSMD7P51665 324 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 OR10A3P58181 314 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 MXD1Q05195 221 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 LOXL1Q08397 574 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 C1orf100Q5SVJ3 147 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 AWAT2Q6E213 333 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 SLC16A12Q6ZSM3 486 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 TPRA1Q86W33 373 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 FAM58AQ8N1B3 248 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 MAPK1IP1LQ8NDC0 245 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 OR10K1Q8NGX5 313 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 C12orf43Q96C57 262 aaKnown RBP11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 NAA50Q9GZZ1 169 aaKnown RBP11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
APOBEC3B-202ENST00000335760 OR2AT4A6NND4 320 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 HTR3BO95264 441 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 TFF1P04155 84 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 CLEC2LP0C7M8 214 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 PSG2P11465 335 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms