RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SMPD2O60906 423 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CER1O95813 267 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 HIST1H1EP10412 219 aaKnown RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 NPBWR2P48146 333 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 VMA21Q3ZAQ7 101 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 HSD11B1LQ7Z5J1 315 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 MDGA1Q8NFP4 955 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 GRAMD2BQ96HH9 432 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 SLC25A33Q9BSK2 321 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TMPRSS13Q9BYE2 586 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TECRQ9NZ01 308 aaKnown RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 GDE1Q9NZC3 331 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 SLCO3A1Q9UIG8 710 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 USP22Q9UPT9 525 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 DOCK4Q8N1I0 1966 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 DNAL4O96015 105 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 GLI4P10075 376 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 LBX1P52954 281 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 RELBQ01201 579 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 SMAD2Q15796 467 aaKnown RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ANKRD55Q3KP44 614 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 SLC48A1Q6P1K1 146 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 PP6455Q8WZ26 134 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 FBXL17Q9UF56 701 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF391Q9UJN7 358 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CLDN18P56856 261 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 AQP6Q13520 282 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 XKR7Q5GH72 579 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 MS4A8Q9BY19 250 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 S1PR5Q9H228 398 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 MSL2Q9HCI7 577 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PEF1Q9UBV8 284 aaKnown RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TOPAZ1Q8N9V7 1692 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 WNT3P56703 355 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TIAL1Q01085 375 aaKnown RBP eCLIP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 STXBP6Q8NFX7 210 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OR10G4Q8NGN3 311 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OR10G9Q8NGN4 311 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OR10G7Q8NGN6 311 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PERPQ96FX8 193 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PLCH1Q4KWH8 1693 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 HAX1O00165 279 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SLC17A3O00476 420 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 AVPR2P30518 371 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 FGF9P31371 208 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SLC19A1P41440 591 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TCL1AP56279 114 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 DLEU7Q6UYE1 221 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PTP4A1Q93096 173 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 FGF20Q9NP95 211 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OR51B4Q9Y5P0 310 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TMPRSS11DO60235 418 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 ACP1P24666 158 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 UBE2L3P68036 154 aaKnown RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 KLRB1Q12918 225 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 CLN3Q13286 438 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PRAMEF20Q5VT98 475 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 FAHD1Q6P587 224 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PRSS54Q6PEW0 395 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 ST8SIA1Q92185 356 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 GUCD1Q96NT3 240 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OR6C1Q96RD1 312 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SAP30LQ9HAJ7 183 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 HINT3Q9NQE9 182 aaKnown RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SIRPB1O00241 398 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 B4GALT3O60512 393 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OPN1LWP04000 364 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SURF2Q15527 256 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TAZQ16635 292 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 CST9Q5W186 159 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TGIF2LXQ8IUE1 241 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 C5orf17Q8NAS9 161 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 MTFP1Q9UDX5 166 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SCN10AQ9Y5Y9 1956 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PRSS37A4D1T9 235 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 MASP2O00187 686 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 ONECUT2O95948 504 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PTGER1P34995 402 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 NMUP48645 174 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF385CQ66K41 422 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 RBM45Q8IUH3 476 aaKnown RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 HES7Q9BYE0 225 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TINAGL1Q9GZM7 467 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 KLK11Q9UBX7 282 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 KCND3Q9UK17 655 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 COA3Q9Y2R0 106 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TGIF2-C20orf24A0A0A6YYL0 155 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 CXorf1O96002 111 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 CSN3P07498 182 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 GLRA1P23415 457 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PITX1P78337 314 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PPP1R1AQ13522 171 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OSR2Q8N2R0 312 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 C9orf62Q8N4C0 152 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OR2C3Q8N628 320 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 BHLHE23Q8NDY6 225 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PSG11Q9UQ72 335 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SLC2A10O95528 541 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms