RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 CCL21O00585 134 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 AQP7O14520 342 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ST8SIA5O15466 376 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 AGFG2O95081 481 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 IFNA1P01562 189 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 IGHMP01871 453 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 DTYMKP23919 212 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 DGCR2P98153 550 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 SSX2Q16385 188 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 SLC25A35Q3KQZ1 300 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 Q6ZS92 163 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR51S1Q8NGJ8 323 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ZCCHC14Q8WYQ9 949 aaKnown RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ADTRPQ96IZ2 230 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF75AQ96N20 296 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 PTDSS2Q9BVG9 487 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 TRAV38-1A0A0B4J264 116 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM210A6NLX4 147 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 CSF3P09919 207 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 PLA1AQ53H76 456 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 CYB5R2Q6BCY4 276 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 FAHD2BQ6P2I3 314 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 DTX1Q86Y01 620 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 FAHD2AQ96GK7 314 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ZC3HAV1LQ96H79 300 aaKnown RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 MYEF2Q9P2K5 600 aaKnown RBP6.02□□□□□ -1.45
SF3B1-201ENST00000335508 CBY3A6NI87 242 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ZSCAN5BA6NJL1 495 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 EDN3P14138 238 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 FAM76BQ5HYJ3 339 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM91Q6ZNR0 172 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 OR5AS1Q8N127 324 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 CD300LFQ8TDQ1 290 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ABHD5Q8WTS1 349 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 WFDC6Q9BQY6 131 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 FN3KRPQ9HA64 309 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 SLC23A1Q9UHI7 598 aa6.02□□□□□ -1.45
SF3B1-201ENST00000335508 ARPC5O15511 151 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 DFFBO76075 338 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 C1QCP02747 245 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ABLIM2Q6H8Q1 611 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PDZD9Q8IXQ8 264 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ABHD17AQ96GS6 310 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ALX4Q9H161 411 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 FRRS1LQ9P0K9 344 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 LSM2Q9Y333 95 aaKnown RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 MIA3Q5JRA6 1907 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 NDUFB3O43676 98 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PATE4P0C8F1 98 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PSG4Q00888 419 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 MEX3BQ6ZN04 569 aaKnown RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ZDHHC22Q8N966 263 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 CIB3Q96Q77 187 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PKIBQ9C010 78 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PDCD11Q14690 1871 aaKnown RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PATJQ8NI35 1801 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 MPPED1O15442 326 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 CD3DP04234 171 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 GZMKP49863 264 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 EDDM3AQ14507 147 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF266Q14584 549 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ESCO2Q56NI9 601 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF468Q5VIY5 522 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 NSUN5P2Q63ZY6 315 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 SEPSECSQ9HD40 501 aaKnown RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 CTDSPLO15194 276 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ADAM11O75078 769 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PNPP00491 289 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 NGFP01138 241 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 UBE2KP61086 200 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 LRRC10Q5BKY1 277 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 BHLHA15Q7RTS1 189 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF546Q86UE3 836 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 MFSD4AQ8N468 514 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 OR4D6Q8NGJ1 314 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM171Q8WVE6 324 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 TUBAL3A6NHL2 446 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 GPR31O00270 319 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 GIPP09681 153 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 RPL35P42766 123 aaKnown RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 TNFAIP6P98066 277 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM30BQ3MIR4 351 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 SFRP5Q5T4F7 317 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 IGF2-ASQ6U949 168 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 PIP4P1Q86T03 277 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 TCTEX1D1Q8N7M0 179 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM229BQ8NBD8 167 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 CXXC4Q9H2H0 198 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 RNF167Q9H6Y7 350 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 CA10Q9NS85 328 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 MRPL22Q9NWU5 206 aaKnown RBP6.01□□□□□ -1.45
SF3B1-201ENST00000335508 NUP50Q9UKX7 468 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 STARD10Q9Y365 291 aa6.01□□□□□ -1.45
SF3B1-201ENST00000335508 ALX3O95076 343 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 MT-ND4P03905 459 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 HOXB5P09067 269 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 MRGPRGQ86SM5 289 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 HEYLQ9NQ87 328 aaPredicted RBP6□□□□□ -1.45
SF3B1-201ENST00000335508 LHFPL6Q9Y693 200 aa6□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM8BA6NDV4 472 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms