RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
SF1-202ENST00000334944 E9PLN8 166 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 TOX3O15405 576 aaPredicted RBP12.18□□□□□ -0.46
SF1-202ENST00000334944 STK17BO94768 372 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 CXCL1P09341 107 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 PGA4P0DJD7 388 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 PGA3P0DJD8 388 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 UNC119Q13432 240 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 RNASE10Q5GAN6 216 aaKnown RBP12.18□□□□□ -0.46
SF1-202ENST00000334944 RAET1LQ5VY80 246 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 OR14K1Q8NGZ2 314 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 ASB13Q8WXK3 278 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 NTNG2Q96CW9 530 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 C2orf88Q9BSF0 95 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 BANF2Q9H503 90 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 LOC400499M0QZD8 3231 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 HSPB2A8KAH6 182 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 IGHG1P01857 330 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 ZNF121P58317 390 aaPredicted RBP12.18□□□□□ -0.46
SF1-202ENST00000334944 HSPB2Q16082 182 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 ZNF468Q5VIY5 522 aaPredicted RBP12.18□□□□□ -0.46
SF1-202ENST00000334944 SLC25A42Q86VD7 318 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 LRP11Q86VZ4 500 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 OR2AJ1Q8NGZ0 328 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 HS3ST3B1Q9Y662 390 aa12.18□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BKO60814 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BJP06899 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 UMODP07911 640 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BOP23527 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BBP33778 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BDP58876 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BCP62807 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 SRSF4Q08170 494 aaKnown RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 PCOLCEQ15113 449 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 GUK1Q16774 197 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST2H2BEQ16778 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 HEPN1Q6WQI6 88 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 FAM57BQ71RH2 274 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 ZNF584Q8IVC4 421 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 ZNF101Q8IZC7 436 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 NOXO1Q8NFA2 376 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BHQ93079 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BNQ99877 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HIST1H2BMQ99879 126 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 TRGC2P03986 189 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 HRH1P35367 487 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 MMP16P51512 607 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 SUMO3P55854 103 aaPredicted RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 NUTF2P61970 127 aaKnown RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 NAAAQ02083 359 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 PCK2Q16822 640 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 FJX1Q86VR8 437 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 ANGPTL5Q86XS5 388 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 TMEM229BQ8NBD8 167 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 OR10AD1Q8NGE0 317 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 LIN37Q96GY3 246 aaPredicted RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 ZNF160Q9HCG1 818 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 GPR84Q9NQS5 396 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 TGIF2-C20orf24A0A0A6YYL0 155 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 EFSO43281 561 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 PHYHD1Q5SRE7 291 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 AWAT2Q6E213 333 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 TCEAL6Q6IPX3 200 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 DTX1Q86Y01 620 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 OR8B12Q8NGG6 310 aa12.17□□□□□ -0.46
SF1-202ENST00000334944 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 ZNF385AQ96PM9 386 aaKnown RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
SF1-202ENST00000334944 BDP1A6H8Y1 2624 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 F5H5K5 113 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 VSIG8P0DPA2 414 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 TRAPPC6BQ86SZ2 158 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 OR10C1Q96KK4 312 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 TUBA4BQ9H853 241 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 SLC2A8Q9NY64 477 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 C19orf25Q9UFG5 118 aaPredicted RBP12.16□□□□□ -0.46
SF1-202ENST00000334944 ZNF705GA8MUZ8 300 aaPredicted RBP12.16□□□□□ -0.46
SF1-202ENST00000334944 RAB27BO00194 218 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 ISG15P05161 165 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 ZNF20P17024 532 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 FSTP19883 344 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 OR3A4PP47883 348 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 SLC6A9P48067 706 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 GABREP78334 506 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 THEM4Q5T1C6 240 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 ZNF283Q8N7M2 679 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 ZNF610Q8N9Z0 462 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 ZNF837Q96EG3 531 aaPredicted RBP12.16□□□□□ -0.46
SF1-202ENST00000334944 SIRT7Q9NRC8 400 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
SF1-202ENST00000334944 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
SF1-202ENST00000334944 PMELP40967 661 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 NPY4RP50391 375 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 TRIM61Q5EBN2 209 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 OR2T2Q6IF00 324 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms