RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ELL3Q9HB65 397 aaPredicted RBP18.15■□□□□ 0.5
TPM1-204ENST00000334895 DECR2Q9NUI1 292 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 FBLN5Q9UBX5 448 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 TACC2O95359 2948 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 TANC2Q9HCD6 1990 aa18.14■□□□□ 0.5
TPM1-204ENST00000334895 ITPR2Q14571 2701 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 DYSFO75923 2080 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 H7C417 338 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 OVOL3O00110 214 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 TPD52L2O43399 206 aaKnown RBP18.14■□□□□ 0.49
TPM1-204ENST00000334895 HPGDSO60760 199 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 PGA5P0DJD9 388 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 TNFRSF1AP19438 455 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 SERPINA2P20848 420 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 CDKN1AP38936 164 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 ERVK11-1P61568 191 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 RSU1Q15404 277 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 LAX1Q8IWV1 398 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 SAMD12Q8N8I0 201 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 Q8NFD4 153 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 Q8TCH9 128 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 S100A13Q99584 98 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 NRIP2Q9BQI9 281 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 EGLN1Q9GZT9 426 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 RBFOX1Q9NWB1 397 aaKnown RBP18.14■□□□□ 0.49
TPM1-204ENST00000334895 TREM2Q9NZC2 230 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 POLDIP2Q9Y2S7 368 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 ETV7Q9Y603 341 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 CACNG2Q9Y698 323 aa18.14■□□□□ 0.49
TPM1-204ENST00000334895 APCP25054 2843 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 USF3Q68DE3 2245 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 AKR7A2O43488 359 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 KRTAP10-9P60411 292 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 MZT2AQ6P582 158 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 OR2W3Q7Z3T1 314 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 NRGNQ92686 78 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 CEP19Q96LK0 163 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 BANF2Q9H503 90 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 DCAF16Q9NXF7 216 aa18.13■□□□□ 0.49
TPM1-204ENST00000334895 hCG_1807616A0A1W2PRN6 198 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 CDC14BO60729 498 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 NOS1APO75052 506 aaPredicted RBP18.12■□□□□ 0.49
TPM1-204ENST00000334895 HTR3BO95264 441 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 CYB5AP00167 134 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 ACAA1P09110 424 aaPredicted RBP18.12■□□□□ 0.49
TPM1-204ENST00000334895 EGR1P18146 543 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 CFHR2P36980 270 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 RANBP1P43487 201 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 POC1AQ8NBT0 407 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 OR6Q1Q8NGQ2 317 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 LRRC29Q8WV35 223 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 ERGIC1Q969X5 290 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 RAB1BQ9H0U4 201 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 PPP1R3CQ9UQK1 317 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 SPG11Q96JI7 2443 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 TRAPPC2LH3BP13 241 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 CRTAPO75718 401 aaPredicted RBP18.12■□□□□ 0.49
TPM1-204ENST00000334895 EIF4EP06730 217 aaKnown RBP18.12■□□□□ 0.49
TPM1-204ENST00000334895 CAPZA1P52907 286 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 ELP2Q6IA86 826 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 METAP1DQ6UB28 335 aaPredicted RBP18.12■□□□□ 0.49
TPM1-204ENST00000334895 GCSAMQ8N6F7 178 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 KCNG3Q8TAE7 436 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 WDR13Q9H1Z4 485 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 IL36RNQ9UBH0 155 aa18.12■□□□□ 0.49
TPM1-204ENST00000334895 CSMD2Q7Z408 3487 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.11■□□□□ 0.49
TPM1-204ENST00000334895 WNT9BO14905 357 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 RGS5O15539 181 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 ZNF780AO75290 641 aaPredicted RBP18.11■□□□□ 0.49
TPM1-204ENST00000334895 LY6HO94772 140 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 MPIG6BO95866 241 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 LHBP01229 141 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 MGMTP16455 207 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 ELK1P19419 428 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 OR10Z1Q8NGY1 313 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 PTX4Q96A99 478 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 CST11Q9H112 138 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 LPAR5Q9H1C0 372 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 HES4Q9HCC6 221 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 RHBDL2Q9NX52 303 aa18.11■□□□□ 0.49
TPM1-204ENST00000334895 SRRM5B3KS81 715 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 NDUFS7O75251 213 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 CYB5R3P00387 301 aaPredicted RBP18.1■□□□□ 0.49
TPM1-204ENST00000334895 RAB6AP20340 208 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 GMFBP60983 142 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 GPR176Q14439 515 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 UBE2NLQ5JXB2 153 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 CDH24Q86UP0 819 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 CMTM4Q8IZR5 234 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 SEH1LQ96EE3 360 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 CCL19Q99731 98 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 GAL3ST1Q99999 423 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 TMEM59Q9BXS4 323 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 RAB22AQ9UL26 194 aa18.1■□□□□ 0.49
TPM1-204ENST00000334895 A0A0A6YYD4 124 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 CSTBP04080 98 aaKnown RBP18.09■□□□□ 0.49
TPM1-204ENST00000334895 FGF12P61328 243 aa18.09■□□□□ 0.49
TPM1-204ENST00000334895 RPS27AP62979 156 aaKnown RBP18.09■□□□□ 0.49
TPM1-204ENST00000334895 PIGYQ3MUY2 71 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms