RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SDSLQ96GA7 329 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 C4orf45Q96LM5 186 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 ALKBH3Q96Q83 286 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-201ENST00000334136 ZNF2Q9BSG1 426 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-201ENST00000334136 DHHO43323 396 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 WNT11O96014 354 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 DAOP14920 347 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 THBS2P35442 1172 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 MEOX2P50222 304 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 RPL23AP62750 156 aaKnown RBP10.4□□□□□ -0.74
HDAC6-201ENST00000334136 SLAMF6Q96DU3 332 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 RSRP1Q9BUV0 290 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 ZNF724A8MTY0 619 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 NPIPB9F8W1W9 429 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 EFNB2P52799 333 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 RAB4BP61018 213 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 PRSS35Q8N3Z0 413 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 TERB2Q8NHR7 220 aa10.4□□□□□ -0.74
HDAC6-201ENST00000334136 UBL7Q96S82 380 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-201ENST00000334136 MRPL22Q9NWU5 206 aaKnown RBP10.4□□□□□ -0.74
HDAC6-201ENST00000334136 TMEM272A0A1B0GTI8 110 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 LOC105371267A0A1B0GV96 52 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 OGG1O15527 345 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 PLA2G5P39877 138 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 ASCL1P50553 236 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 RAB11AP62491 216 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 Q0VFX4 171 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 TESK1Q15569 626 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 TBR1Q16650 682 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 SP6Q3SY56 376 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 ZNF561Q8N587 486 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 ZNF441Q8N8Z8 693 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 TMEM229BQ8NBD8 167 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 OR52N5Q8NH56 324 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 OTOSQ8NHW6 89 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 GPR84Q9NQS5 396 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 FRRS1LQ9P0K9 344 aa10.4□□□□□ -0.75
HDAC6-201ENST00000334136 MRM2Q9UI43 246 aaKnown RBP10.4□□□□□ -0.75
HDAC6-201ENST00000334136 ZNF407Q9C0G0 2248 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 C1QTNF9BB2RNN3 333 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 PLPP3O14495 311 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 ARPC3O15145 178 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 SEMA7AO75326 666 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 HLA-DQB1P01920 261 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 RFPL3SP0C7P2 107 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 C1QTNF9P0C862 333 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 F2RL1P55085 397 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 PJVKQ0ZLH3 352 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 CEACAM16Q2WEN9 425 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 WDR88Q6ZMY6 472 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 OR6K3Q8NGY3 331 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 HINT2Q9BX68 163 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 MYO7BQ6PIF6 2116 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 A0A096LPE4 126 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 A0A1W2PPZ6 126 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 GSTZ1O43708 216 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-201ENST00000334136 ZIC2O95409 532 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-201ENST00000334136 TK1P04183 234 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 HOXB9P17482 250 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-201ENST00000334136 MSR1P21757 451 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 TAF9Q16594 264 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 TMEM123Q8N131 208 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 NINJ1Q92982 152 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 UCN2Q96RP3 112 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 LRP12Q9Y561 859 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 ATXN7O15265 892 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-201ENST00000334136 BPNT1O95861 308 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 GCH1P30793 250 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 TMEM128Q5BJH2 165 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 GJC3Q8NFK1 279 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 RBMXL1Q96E39 390 aaKnown RBP10.39□□□□□ -0.75
HDAC6-201ENST00000334136 FBXO17Q96EF6 278 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 SLC25A31Q9H0C2 315 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 ZNF286AQ9HBT8 521 aa10.39□□□□□ -0.75
HDAC6-201ENST00000334136 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 VSIG10L2P0DP72 767 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 PTAFRP25105 342 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 NANOS3P60323 173 aaKnown RBP10.38□□□□□ -0.75
HDAC6-201ENST00000334136 FMODQ06828 376 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 RAB32Q13637 225 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 RPUSD3Q6P087 351 aaKnown RBP10.38□□□□□ -0.75
HDAC6-201ENST00000334136 MRPL21Q7Z2W9 205 aaKnown RBP10.38□□□□□ -0.75
HDAC6-201ENST00000334136 OR13C8Q8NGS7 320 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 CMTM3Q96MX0 182 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 PAPOLGQ9BWT3 736 aaKnown RBP10.38□□□□□ -0.75
HDAC6-201ENST00000334136 ADAM19Q9H013 955 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 METTL9Q9H1A3 318 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 GAB2Q9UQC2 676 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 CLDN16Q9Y5I7 305 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 CD300LBA8K4G0 201 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 CRYBA1P05813 215 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 SPP1P10451 314 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 ATPAF1Q5TC12 328 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-201ENST00000334136 SHEQ5VZ18 495 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 PLCXD3Q63HM9 321 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 MOB3CQ70IA8 216 aa10.38□□□□□ -0.75
HDAC6-201ENST00000334136 STPG2Q8N412 459 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms