RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 MTFR2Q6P444 385 aa19.86■□□□□ 0.77
TSEN54-201ENST00000333213 C1orf174Q8IYL3 243 aa19.86■□□□□ 0.77
TSEN54-201ENST00000333213 SLC23A1Q9UHI7 598 aa19.86■□□□□ 0.77
TSEN54-201ENST00000333213 TRAV6A0A075B6T7 132 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 NAP1L6A6NFF2 107 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 ANGPTL7O43827 346 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 PRAF2O60831 178 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 PLATP00750 562 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 H2AFB2P0C5Z0 115 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 CDK2P24941 298 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 VHLLQ6RSH7 139 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 PNLDC1Q8NA58 520 aaKnown RBP19.85■□□□□ 0.77
TSEN54-201ENST00000333213 RAB40AQ8WXH6 277 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 GAL3ST1Q99999 423 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 NPTNQ9Y639 398 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 AUP1Q9Y679 476 aa19.85■□□□□ 0.77
TSEN54-201ENST00000333213 IGKV1-12A0A0C4DH73 117 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 TPPPO94811 219 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 IGKV1D-12P01611 117 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 ZNF250P15622 560 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 SRP9P49458 86 aaKnown RBP19.84■□□□□ 0.77
TSEN54-201ENST00000333213 DGCR2P98153 550 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 Q6ZR03 302 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 OR10K1Q8NGX5 313 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 S100A16Q96FQ6 103 aaKnown RBP19.84■□□□□ 0.77
TSEN54-201ENST00000333213 FBLN5Q9UBX5 448 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 MGAT4AQ9UM21 535 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 SPEF1Q9Y4P9 236 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 H0YL77 283 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 SNAPC5O75971 98 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 ECDO95905 644 aaPredicted RBP19.84■□□□□ 0.77
TSEN54-201ENST00000333213 CD3GP09693 182 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 SELEP16581 610 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 GIFP27352 417 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 ATP1B3P54709 279 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 SORDQ00796 357 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 SLC22A6Q4U2R8 563 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 OR5A2Q8NGI9 324 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 PTX4Q96A99 478 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 NPDC1Q9NQX5 325 aaPredicted RBP19.84■□□□□ 0.77
TSEN54-201ENST00000333213 ZNF222Q9UK12 451 aa19.84■□□□□ 0.77
TSEN54-201ENST00000333213 MRPS7Q9Y2R9 242 aaKnown RBP19.84■□□□□ 0.77
TSEN54-201ENST00000333213 KMT2BQ9UMN6 2715 aaPredicted RBP19.83■□□□□ 0.77
TSEN54-201ENST00000333213 ZNF732B4DXR9 585 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 MLNRO43193 412 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 GCH1P30793 250 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 PTH2RP49190 550 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 MRPS10P82664 201 aaKnown RBP19.83■□□□□ 0.77
TSEN54-201ENST00000333213 MOGAT2Q3SYC2 334 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 TEX261Q6UWH6 196 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 OR8G5Q8NG78 346 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 U3KQ87 197 aa19.83■□□□□ 0.77
TSEN54-201ENST00000333213 HCFC1P51610 2035 aa19.83■□□□□ 0.76
TSEN54-201ENST00000333213 SLC22A5O76082 557 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 TMEM225BP0DP42 221 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 PTHLHP12272 177 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 AP3S2P59780 193 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 PDZK1IP1Q13113 114 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 WDR86Q86TI4 376 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 NUP37Q8NFH4 326 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 ATG5Q9H1Y0 275 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 BANF2Q9H503 90 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 NDRG3Q9UGV2 375 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 DUSP13Q9UII6 198 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 SCP2D1Q9UJQ7 156 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 RAB22AQ9UL26 194 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 WIPF3A6NGB9 483 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 RAB6AP20340 208 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 HAAOP46952 286 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 AP2S1P53680 142 aaPredicted RBP19.82■□□□□ 0.76
TSEN54-201ENST00000333213 NCMAPQ5T1S8 102 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 ASCL4Q6XD76 172 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 CCDC28AQ8IWP9 274 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 OR8H1Q8NGG4 311 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 C15orf40Q8WUR7 153 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 GCDHQ92947 438 aaPredicted RBP19.82■□□□□ 0.76
TSEN54-201ENST00000333213 MSL2Q9HCI7 577 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 PLCE1Q9P212 2302 aa19.82■□□□□ 0.76
TSEN54-201ENST00000333213 LEUTXA8MZ59 168 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 SIAH2O43255 324 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 TIMM8AO60220 97 aaPredicted RBP19.81■□□□□ 0.76
TSEN54-201ENST00000333213 CDC14BO60729 498 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 IGHV3-13P01766 116 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 MNDAP41218 407 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 CAPZA1P52907 286 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 ADAM5Q6NVV9 412 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 SLC22A25Q6T423 547 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 DMRTC2Q8IXT2 367 aaPredicted RBP19.81■□□□□ 0.76
TSEN54-201ENST00000333213 ZNF611Q8N823 705 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 NICN1Q9BSH3 213 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 ADAT1Q9BUB4 502 aaKnown RBP19.81■□□□□ 0.76
TSEN54-201ENST00000333213 LPAR5Q9H1C0 372 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 CA10Q9NS85 328 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 GHRLQ9UBU3 117 aa19.81■□□□□ 0.76
TSEN54-201ENST00000333213 IGLV3-9A0A075B6K5 115 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 A0A0A6YYD4 124 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 GABARAPH6UMI1 98 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 SHOXO15266 292 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 XRCC3O43542 346 aa19.8■□□□□ 0.76
TSEN54-201ENST00000333213 PEX14O75381 377 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms