RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ALX3O95076 343 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 CD2P06729 351 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 AZGP1P25311 298 aaKnown RBP11.63□□□□□ -0.55
LIMS1-201ENST00000332345 C21orf33P30042 268 aaPredicted RBP11.63□□□□□ -0.55
LIMS1-201ENST00000332345 TAS2R43P59537 309 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 IKZF1Q13422 519 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 RNLSQ5VYX0 342 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 NANOGP1Q8N7R0 232 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 RPS4Y2Q8TD47 263 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 SMIM19Q96E16 107 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF488Q96MN9 340 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 OPALINQ96PE5 141 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 NRIP2Q9BQI9 281 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 SMURF1Q9HCE7 757 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 FKBP14Q9NWM8 211 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF281Q9Y2X9 895 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 PCDHGB5Q9Y5G0 923 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 IGKV1D-17A0A075B6S4 117 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 IGKV1-27A0A075B6S5 117 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 RFPL4AA6NLU0 287 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 C22orf46C9J442 243 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 RFPL4AL1F8VTS6 287 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 SLC1A7O00341 560 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 SIGLEC5O15389 551 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 MAGEB3O15480 346 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 CDK1P06493 297 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 ADRA2CP18825 462 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 AMY2BP19961 511 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 FPR2P25090 351 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 PRDX2P32119 198 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 VHLP40337 213 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 WNT4P56705 351 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 ERVK11-1P61568 191 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 DMKNQ6E0U4 476 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-201ENST00000332345 XAF1Q6GPH4 301 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 SLC25A26Q70HW3 274 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 Q8IYB0 196 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 FAM216BQ8N7L0 139 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF485Q8NCK3 441 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 OR13C9Q8NGT0 318 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 GHSRQ92847 366 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 DACT3Q96B18 629 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-201ENST00000332345 CEP19Q96LK0 163 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 DMRTB1Q96MA1 342 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 GAFA1Q96PS6 74 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 CNTD2Q9H8S5 307 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 MTCH1Q9NZJ7 389 aa11.62□□□□□ -0.55
LIMS1-201ENST00000332345 SLC25A10Q9UBX3 287 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-201ENST00000332345 SIRT4Q9Y6E7 314 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-201ENST00000332345 SULT1B1O43704 296 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 PLATP00750 562 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 KNG1P01042 644 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 NDUFB7P17568 137 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 EPHA1P21709 976 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 CAV3P56539 151 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 PDZK1IP1Q13113 114 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF561Q8N587 486 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 SLAMF9Q96A28 289 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 CPNE2Q96FN4 548 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-201ENST00000332345 SDSLQ96GA7 329 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 MND1Q9BWT6 205 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 CDCA4Q9BXL8 241 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 HES4Q9HCC6 221 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 RPUSD1Q9UJJ7 312 aaKnown RBP11.61□□□□□ -0.55
LIMS1-201ENST00000332345 NUP50Q9UKX7 468 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 RAB26Q9ULW5 256 aa11.61□□□□□ -0.55
LIMS1-201ENST00000332345 A0A1B0GW55 424 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF879B4DU55 563 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 TCF21O43680 179 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 INMTO95050 263 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 LALBAP00709 142 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 HCKP08631 526 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4L2P0CJ85 424 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4L3P0CJ86 424 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4L4P0CJ87 422 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4L5P0CJ88 424 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4L6P0CJ89 424 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4L7P0CJ90 424 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 RAB3AP20336 220 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 SOX2P48431 317 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 POU3F4P49335 361 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 CAPZA1P52907 286 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 FGF12P61328 243 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DGUOKQ16854 277 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 YIF1BQ5BJH7 314 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 METTL11BQ5VVY1 283 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-201ENST00000332345 FIP1L1Q6UN15 594 aaKnown RBP11.6□□□□□ -0.55
LIMS1-201ENST00000332345 ZNRF1Q8ND25 227 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 LY6G5BQ8NDX9 201 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
LIMS1-201ENST00000332345 TMEM106AQ96A25 262 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 UPRTQ96BW1 309 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 RHOFQ9HBH0 211 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 DUX4Q9UBX2 424 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF222Q9UK12 451 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms