RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CT45A2Q5DJT8 189 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 NCR3LG1Q68D85 454 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 LGI3Q8N145 548 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 TSLPQ969D9 159 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 MRPL24Q96A35 216 aaKnown RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 MACROD1Q9BQ69 325 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 ZNF2Q9BSG1 426 aaPredicted RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 TMEM59Q9BXS4 323 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 NAT8Q9UHE5 227 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 SCN5AQ14524 2016 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 TRIOBPQ9H2D6 2365 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 TRAV39A0A0B4J263 110 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 PIGBOS1A0A0B4J2F0 54 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 FOXI3A8MTJ6 420 aaPredicted RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 TNFSF14O43557 240 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 HLA-DQA2P01906 255 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 PPBPP02775 128 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 FOSL2P15408 326 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 SELPP16109 830 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 UCP1P25874 307 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 TMEM50BP56557 158 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 PAFAH1B2P68402 229 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 ZFP36L1Q07352 338 aaKnown RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 TCEA2Q15560 299 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 KCNMB1Q16558 191 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 C4orf17Q53FE4 359 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 TMEM215Q68D42 235 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 PSRC1Q6PGN9 363 aaPredicted RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 DNM1P34Q6PK57 102 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 SSX7Q7RTT5 188 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 TMEM25Q86YD3 366 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 CRIPAKQ8N1N5 446 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 FAM160A2Q8N612 972 aaPredicted RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 OR2C3Q8N628 320 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 C10orf53Q8N6V4 93 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 OR4D5Q8NGN0 318 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 C1orf147Q96MC9 270 aaPredicted RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 OR5B12Q96R08 314 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 OR2J1Q9GZK6 312 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 MTIF3Q9H2K0 278 aaKnown RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 NAA60Q9H7X0 242 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 CAPN10Q9HC96 672 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 IL23AQ9NPF7 189 aa7.37□□□□□ -1.23
SKA2-201ENST00000330137 LYRM2Q9NU23 88 aaPredicted RBP7.37□□□□□ -1.23
SKA2-201ENST00000330137 LAMA3Q16787 3333 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 A0A0A6YYD4 124 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 CLEC18AA5D8T8 446 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 CYR61O00622 381 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 IFNA1P01562 189 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 SLC6A8P48029 635 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 UCP3P55916 312 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 IL24Q13007 206 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 ARFRP1Q13795 201 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 TMEM183BQ1AE95 376 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 PTCRAQ6ISU1 281 aaPredicted RBP7.36□□□□□ -1.23
SKA2-201ENST00000330137 ZNF66Q6ZN08 573 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 CLEC18CQ8NCF0 446 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 OR52R1Q8NGF1 315 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 OR51G1Q8NGK1 321 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 MBD3L1Q8WWY6 194 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 SCARF2Q96GP6 870 aaPredicted RBP7.36□□□□□ -1.23
SKA2-201ENST00000330137 VSTM2LQ96N03 204 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 SLC46A1Q96NT5 459 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 OR10A2Q9H208 303 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 TXNIPQ9H3M7 391 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 GPR35Q9HC97 309 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 PADI1Q9ULC6 663 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 MRPS28Q9Y2Q9 187 aaKnown RBP7.36□□□□□ -1.23
SKA2-201ENST00000330137 EMC9Q9Y3B6 208 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 FANCMQ8IYD8 2048 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 DUXBA0A1W2PPF3 345 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 C20orf202A1L168 122 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 MAP1LC3B2A6NCE7 125 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 NKX6-3A6NJ46 265 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 HCRTR2O43614 444 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 KNG1P01042 644 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 IGKV1D-16P01601 117 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 BCL2P10415 239 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 PI3P19957 117 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 PEBP1P30086 187 aaKnown RBP7.36□□□□□ -1.23
SKA2-201ENST00000330137 RPL29P47914 159 aaKnown RBP7.36□□□□□ -1.23
SKA2-201ENST00000330137 VAMP2P63027 116 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 RPP30P78346 268 aaKnown RBP7.36□□□□□ -1.23
SKA2-201ENST00000330137 EGR4Q05215 589 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 SGCBQ16585 318 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 FNDC7Q5VTL7 733 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 COX15Q7KZN9 410 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 RNF44Q7L0R7 432 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 ZCCHC14Q8WYQ9 949 aaKnown RBP7.36□□□□□ -1.23
SKA2-201ENST00000330137 FAM122AQ96E09 287 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 SPIN2AQ99865 258 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 SPIN2BQ9BPZ2 258 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 FAAP24Q9BTP7 215 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 TM2D1Q9BX74 207 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 MAP1LC3BQ9GZQ8 125 aa7.36□□□□□ -1.23
SKA2-201ENST00000330137 ZNF700Q9H0M5 742 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms