RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 HMG20AQ9NP66 347 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 MYO7BQ6PIF6 2116 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 LOC100506127A0A0U1RQW1 187 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 MCRIP1C9JLW8 97 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 PPIHO43447 177 aaKnown RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 RGS11O94810 467 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ARSBP15848 533 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 TBPP20226 339 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 USF1P22415 310 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GPM6AP51674 278 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ARPC4P59998 168 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 C1orf122Q6ZSJ8 110 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 MYPOPQ86VE0 399 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 SATL1Q86VE3 508 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 HPSE2Q8WWQ2 592 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 SLC25A46Q96AG3 418 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 S100A16Q96FQ6 103 aaKnown RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 DCSTAMPQ9H295 470 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GHITMQ9H3K2 345 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 POFUT1Q9H488 388 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ELL3Q9HB65 397 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 PATZ1Q9HBE1 687 aaKnown RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 TMEM160Q9NX00 188 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 TAS2R3Q9NYW6 316 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 A0A0G2JK05 382 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 hADV38S2A0JD32 116 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 MLNRO43193 412 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 PLAUP00749 431 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 LHBP01229 141 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 CD8AP01732 235 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 IGHV2-70P01814 119 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 TFAP2AP05549 437 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GRPP07492 148 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GSTT2BP0CG30 244 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ARHGDIBP52566 201 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GTF2A1P52655 376 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ZP1P60852 638 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF154Q13106 437 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 CLEC12BQ2HXU8 276 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF404Q494X3 552 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 CEP78Q5JTW2 689 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 LY6G6FQ5SQ64 297 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 NCR3LG1Q68D85 454 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 C22orf42Q6IC83 251 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 SFXN4Q6P4A7 337 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 BTNL3Q6UXE8 466 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 ACP7Q6ZNF0 438 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 TMEM91Q6ZNR0 172 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GLCCI1Q86VQ1 547 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 RGP1Q92546 391 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 HTRA1Q92743 480 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 RNF166Q96A37 237 aaPredicted RBP4.37□□□□□ -1.71
LRIT3-201ENST00000327908 FAM3DQ96BQ1 224 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 BARHL1Q9BZE3 327 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GAL3ST2Q9H3Q3 398 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 GCM1Q9NP62 436 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 KCNIP1Q9NZI2 227 aa4.37□□□□□ -1.71
LRIT3-201ENST00000327908 TLN1Q9Y490 2541 aaKnown RBP4.36□□□□□ -1.71
LRIT3-201ENST00000327908 KIR2DS1A0A191URI9 304 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 TMEM30CPA0ZSE6 113 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 F5H5P2 479 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 M0R1W7 72 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 DEGS1O15121 323 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 SIGLEC5O15389 551 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 PDCD6O75340 191 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 RP2O75695 350 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 CDRT1O95170 752 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 HTR3BO95264 441 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 SOD3P08294 240 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 FUT3P21217 361 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 IL3RAP26951 378 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 KIR2DS4P43632 304 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 DVL1P1P54792 670 aaPredicted RBP4.36□□□□□ -1.71
LRIT3-201ENST00000327908 RBM11P57052 281 aaKnown RBP4.36□□□□□ -1.71
LRIT3-201ENST00000327908 AP3S2P59780 193 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 ERVK11-1P61568 191 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 KIR2DS1Q14954 304 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 UBE2V2Q15819 145 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 GLIPR1L1Q6UWM5 242 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 WDR82Q6UXN9 313 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 SLC25A26Q70HW3 274 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 GAL3ST1Q99999 423 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 ZMAT3Q9HA38 289 aaKnown RBP4.36□□□□□ -1.71
LRIT3-201ENST00000327908 TAS2R8Q9NYW2 309 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF319Q9P2F9 582 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 UBE2J1Q9Y385 318 aaPredicted RBP4.36□□□□□ -1.71
LRIT3-201ENST00000327908 TRBV6-6A0A0A6YYG2 114 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 SLC22A5O76082 557 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 LALBAP00709 142 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 CD3GP09693 182 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 RPS2P15880 293 aaKnown RBP4.36□□□□□ -1.71
LRIT3-201ENST00000327908 DTYMKP23919 212 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 LMO1P25800 156 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 ECI1P42126 302 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 ERVS71-1P61550 626 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 RPS27AP62979 156 aaKnown RBP4.36□□□□□ -1.71
LRIT3-201ENST00000327908 GUCA2AQ02747 115 aa4.36□□□□□ -1.71
LRIT3-201ENST00000327908 PDCD1Q15116 288 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms